RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 OR5T2Q8NGG2 359 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 OR51G2Q8NGK0 314 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 OR1K1Q8NGR3 316 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 OR6F1Q8NGZ6 308 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 CNIH3Q8TBE1 160 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 SMAP2Q8WU79 429 aaPredicted RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 MCUR1Q96AQ8 359 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 C10orf35Q96D05 121 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 PITPNM3Q9BZ71 974 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 TMEM185BQ9H7F4 350 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 MRPL39Q9NYK5 338 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 EIF3KQ9UBQ5 218 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 CFAP45Q9UL16 551 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 EIF3LQ9Y262 564 aaKnown RBP4.33□□□□□ -1.72
RFC3-203ENST00000616236 CA5BQ9Y2D0 317 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 NPTNQ9Y639 398 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 MAD1L1Q9Y6D9 718 aa4.33□□□□□ -1.72
RFC3-203ENST00000616236 NPIPA5A0A0B4J1W7 369 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 A0A1B0GTQ1 180 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 LRP5LA4QPB2 252 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 ZNF724A8MTY0 619 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 NPIPA5E9PKD4 350 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SPECC1L-ADORA2AF8WAN1 911 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 PDLIM1O00151 329 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 ZNF195O14628 629 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 KCNAB3O43448 404 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 N4BP1O75113 896 aaKnown RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 SLITRK3O94933 977 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 NADKO95544 446 aaPredicted RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 ALOX5P09917 674 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 HSMCR30P0CW71 290 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 PGCP20142 388 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 MMP11P24347 488 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 PTBP1P26599 531 aaKnown RBP eCLIP4.32□□□□□ -1.729e-8■■■■■ 31
RFC3-203ENST00000616236 SAA4P35542 130 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 FDFT1P37268 417 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 P2RY1P47900 373 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 PEX3P56589 373 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 HAND2P61296 217 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 RPS27AP62979 156 aaKnown RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 IL9RQ01113 521 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 C1orf61Q13536 156 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 WDR43Q15061 677 aaKnown RBP eCLIP4.32□□□□□ -1.72
RFC3-203ENST00000616236 ALKBH6Q3KRA9 238 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 GTDC1Q4AE62 458 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 TMEM52BQ4KMG9 183 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 XKR7Q5GH72 579 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 C6orf226Q5I0X4 101 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 AADACL4Q5VUY2 407 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 LIPNQ5VXI9 398 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SLX4IPQ5VYV7 408 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 C11orf87Q6NUJ2 197 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SCYL2Q6P3W7 929 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 VITQ6UXI7 678 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SH2D5Q6ZV89 423 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 CHMP1BQ7LBR1 199 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 C16orf82Q7Z2V1 217 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 PTAR1Q7Z6K3 402 aaPredicted RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 DHDDSQ86SQ9 333 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 TGIF2LXQ8IUE1 241 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SPATA2LQ8IUW3 424 aaPredicted RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 EGFL6Q8IUX8 553 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 CIARTQ8N365 385 aaPredicted RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 STPG4Q8N801 248 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 Q8N9G6 341 aaPredicted RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 TMEM178AQ8NBL3 297 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 TM9SF4Q92544 642 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 CD101Q93033 1021 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 TADA1Q96BN2 335 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 HMCESQ96FZ2 354 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SLC38A2Q96QD8 506 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 COPS8Q99627 209 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SLC6A7Q99884 636 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SLC30A2Q9BRI3 323 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 TMEM121Q9BTD3 319 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 GPR174Q9BXC1 333 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 PARD6BQ9BYG5 372 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SCAND2PQ9GZW5 306 aaPredicted RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 GLT8D2Q9H1C3 349 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 EHD1Q9H4M9 534 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 DDX31Q9H8H2 851 aaKnown RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 ANKRA2Q9H9E1 313 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 NMUR1Q9HB89 426 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 SLC17A5Q9NRA2 495 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 TAS2R16Q9NYV7 291 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 POLDIP2Q9Y2S7 368 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 DHRS7Q9Y394 339 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 EXOSC1Q9Y3B2 195 aaKnown RBP4.32□□□□□ -1.72
RFC3-203ENST00000616236 TIMM10BQ9Y5J6 103 aa4.32□□□□□ -1.72
RFC3-203ENST00000616236 NINLQ9Y2I6 1382 aa4.31□□□□□ -1.72
RFC3-203ENST00000616236 A0A1W2PNV4 684 aa4.31□□□□□ -1.72
RFC3-203ENST00000616236 PLSCR5A0PG75 271 aa4.31□□□□□ -1.72
RFC3-203ENST00000616236 NPIPA7E9PJI5 369 aa4.31□□□□□ -1.72
RFC3-203ENST00000616236 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.31□□□□□ -1.72
RFC3-203ENST00000616236 INPP4BO15327 924 aa4.31□□□□□ -1.72
RFC3-203ENST00000616236 LRATO95237 230 aa4.31□□□□□ -1.72
RFC3-203ENST00000616236 CLPTM1O96005 669 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms