RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ROR2Q01974 943 aaKnown RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 APOBEC3HQ6NTF7 200 aaKnown RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 LEG1Q6P5S2 330 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 LRRC57Q8N9N7 239 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 DLGAP4Q9Y2H0 992 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 RP1P56715 2156 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 SOD2P04179 222 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 CT45A10P0DMU9 189 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 TMEM107Q6UX40 140 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ZNF836Q6ZNA1 936 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ARID1BQ8NFD5 2236 aaPredicted RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 FOXE1O00358 373 aaPredicted RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 CDRT1O95170 752 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ARAFP10398 606 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 XCR1P46094 333 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ZNF45Q02386 682 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ZNF468Q5VIY5 522 aaPredicted RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 TMEM205Q6UW68 189 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 LCLAT1Q6UWP7 414 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 PHF13Q86YI8 300 aaPredicted RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 GGHQ92820 318 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 KIAA1191Q96A73 305 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 TCEAL4Q96EI5 215 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 PDZD7Q9H5P4 517 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 SPHK2Q9NRA0 654 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 THSD1Q9NS62 852 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 OPN1LWP04000 364 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 NUDT6P53370 316 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 EGFLAMQ63HQ2 1017 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 BEST3Q8N1M1 668 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ACBD4Q8NC06 268 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 ASB11Q8WXH4 323 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 CMSS1Q9BQ75 279 aaKnown RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 TMEM45AQ9NWC5 275 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 VEGFCP49767 419 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 SERTAD2Q14140 314 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 FAM199XQ6PEV8 388 aaPredicted RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 DPEP3Q9H4B8 488 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 CDCP1Q9H5V8 836 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 A3GALT2U3KPV4 340 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 PRR36Q9H6K5 1346 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
TCF4-248ENST00000616053 PDLIM1O00151 329 aa12□□□□□ -0.49
TCF4-248ENST00000616053 ZNF821O75541 412 aaPredicted RBP12□□□□□ -0.49
TCF4-248ENST00000616053 ACTC1P68032 377 aa12□□□□□ -0.49
TCF4-248ENST00000616053 ACTA1P68133 377 aa12□□□□□ -0.49
TCF4-248ENST00000616053 NXNL2Q5VZ03 156 aa12□□□□□ -0.49
TCF4-248ENST00000616053 UGT2A3Q6UWM9 527 aa12□□□□□ -0.49
TCF4-248ENST00000616053 OR1J4Q8NGS1 313 aa12□□□□□ -0.49
TCF4-248ENST00000616053 SUCNR1Q9BXA5 334 aa12□□□□□ -0.49
TCF4-248ENST00000616053 XPNPEP2O43895 674 aa12□□□□□ -0.49
TCF4-248ENST00000616053 HTR3AP46098 478 aa12□□□□□ -0.49
TCF4-248ENST00000616053 C19orf35Q6ZS72 473 aa12□□□□□ -0.49
TCF4-248ENST00000616053 OR2T33Q8NG76 320 aa12□□□□□ -0.49
TCF4-248ENST00000616053 EPS8L1Q8TE68 723 aa12□□□□□ -0.49
TCF4-248ENST00000616053 ATP13A2Q9NQ11 1180 aa12□□□□□ -0.49
TCF4-248ENST00000616053 SMIM30A4D0T7 59 aa12□□□□□ -0.49
TCF4-248ENST00000616053 GTF2BQ00403 316 aa12□□□□□ -0.49
TCF4-248ENST00000616053 SYT14Q8NB59 555 aa12□□□□□ -0.49
TCF4-248ENST00000616053 OR2T4Q8NH00 348 aa12□□□□□ -0.49
TCF4-248ENST00000616053 DPH7Q9BTV6 452 aa12□□□□□ -0.49
TCF4-248ENST00000616053 SOX17Q9H6I2 414 aaPredicted RBP12□□□□□ -0.49
TCF4-248ENST00000616053 ACP6Q9NPH0 428 aa12□□□□□ -0.49
TCF4-248ENST00000616053 SIGLEC6O43699 453 aa12□□□□□ -0.49
TCF4-248ENST00000616053 HNRNPA2B1P22626 353 aaKnown RBP12□□□□□ -0.49
TCF4-248ENST00000616053 TMEM65Q6PI78 240 aa12□□□□□ -0.49
TCF4-248ENST00000616053 LRRC18Q8N456 261 aa12□□□□□ -0.49
TCF4-248ENST00000616053 TSSK2Q96PF2 358 aa12□□□□□ -0.49
TCF4-248ENST00000616053 TSNAXQ99598 290 aaKnown RBP12□□□□□ -0.49
TCF4-248ENST00000616053 MRI1Q9BV20 369 aa12□□□□□ -0.49
TCF4-248ENST00000616053 COL20A1Q9P218 1284 aa12□□□□□ -0.49
TCF4-248ENST00000616053 NPTNQ9Y639 398 aa12□□□□□ -0.49
TCF4-248ENST00000616053 PRAMEF26H0Y7S4 382 aa12□□□□□ -0.49
TCF4-248ENST00000616053 CA3P07451 260 aa12□□□□□ -0.49
TCF4-248ENST00000616053 IL1R2P27930 398 aa12□□□□□ -0.49
TCF4-248ENST00000616053 NKX6-1P78426 367 aaPredicted RBP12□□□□□ -0.49
TCF4-248ENST00000616053 NHSL2Q5HYW2 709 aa12□□□□□ -0.49
TCF4-248ENST00000616053 PIWIL3Q7Z3Z3 882 aaKnown RBP12□□□□□ -0.49
TCF4-248ENST00000616053 PHC2Q8IXK0 858 aa12□□□□□ -0.49
TCF4-248ENST00000616053 OR10AD1Q8NGE0 317 aa12□□□□□ -0.49
TCF4-248ENST00000616053 ACSS1Q9NUB1 689 aaPredicted RBP12□□□□□ -0.49
TCF4-248ENST00000616053 FBXW11Q9UKB1 542 aa12□□□□□ -0.49
TCF4-248ENST00000616053 PUS1Q9Y606 427 aaKnown RBP eCLIP12□□□□□ -0.49
TCF4-248ENST00000616053 M0QX08 132 aa12□□□□□ -0.49
TCF4-248ENST00000616053 LSM1O15116 133 aaKnown RBP12□□□□□ -0.49
TCF4-248ENST00000616053 BCAT2O15382 392 aaPredicted RBP12□□□□□ -0.49
TCF4-248ENST00000616053 ACVR1BP36896 505 aa12□□□□□ -0.49
TCF4-248ENST00000616053 MRPL19P49406 292 aaKnown RBP12□□□□□ -0.49
TCF4-248ENST00000616053 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.49
TCF4-248ENST00000616053 RPS23P62266 143 aaKnown RBP12□□□□□ -0.49
TCF4-248ENST00000616053 ACTA2P62736 377 aa12□□□□□ -0.49
TCF4-248ENST00000616053 ACTG2P63267 376 aa12□□□□□ -0.49
TCF4-248ENST00000616053 EDDM3AQ14507 147 aa12□□□□□ -0.49
TCF4-248ENST00000616053 SLC16A14Q7RTX9 510 aa12□□□□□ -0.49
TCF4-248ENST00000616053 OR13C4Q8NGS5 318 aa12□□□□□ -0.49
TCF4-248ENST00000616053 HAS2Q92819 552 aa12□□□□□ -0.49
TCF4-248ENST00000616053 PLSCR3Q9NRY6 295 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms