RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 B3GNT4Q9C0J1 378 aa13.92□□□□□ -0.18
SNPH-203ENST00000614659 HS3ST2Q9Y278 367 aa13.92□□□□□ -0.18
SNPH-203ENST00000614659 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
SNPH-203ENST00000614659 GNAO1P09471 354 aa13.92□□□□□ -0.18
SNPH-203ENST00000614659 MSL3P1P0C860 447 aa13.92□□□□□ -0.18
SNPH-203ENST00000614659 ZNF81P51508 661 aa13.92□□□□□ -0.18
SNPH-203ENST00000614659 RAB40BQ12829 278 aa13.92□□□□□ -0.18
SNPH-203ENST00000614659 ACSS1Q9NUB1 689 aaPredicted RBP13.92□□□□□ -0.18
SNPH-203ENST00000614659 A0A1B0GVI7 797 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 OTX2P32243 289 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 RGRP47804 291 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 ZNF542PQ5EBM4 170 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 OR6N1Q8NGY5 312 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 GAL3ST3Q96A11 431 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 CHMP1AQ9HD42 196 aaPredicted RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 DNAJB6O75190 326 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 PGCP20142 388 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 CDK3Q00526 305 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 SLC35F1Q5T1Q4 408 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 HACD4Q5VWC8 232 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 SNX29P2Q8IUI4 249 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 PM20D2Q8IYS1 436 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 CLEC1AQ8NC01 280 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 DUS3LQ96G46 650 aaKnown RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 ZNF285Q96NJ3 590 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 INPP5EQ9NRR6 644 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 THAP10Q9P2Z0 257 aaPredicted RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 GABRR3A8MPY1 467 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 OR7A17O14581 309 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 PCDH17O14917 1159 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 ANXA3P12429 323 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 ABCA11PQ4W5N1 156 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 LIPIQ6XZB0 460 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 CYP4V2Q6ZWL3 525 aaPredicted RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 CDRT4Q8N9R6 151 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 SGCDQ92629 289 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 MAL2Q969L2 176 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 NEIL2Q969S2 332 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 C1SP09871 688 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 SRFP11831 508 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 RRADP55042 308 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 USF2Q15853 346 aaPredicted RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 FAM83HQ6ZRV2 1179 aaPredicted RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 PARS2Q7L3T8 475 aaKnown RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 OR8K5Q8NH50 307 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 GATAD2BQ8WXI9 593 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 TANKQ92844 425 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 TRIM43Q96BQ3 446 aaPredicted RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 C12orf71A8MTZ7 269 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 CSF2P04141 144 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 UGT2B10P36537 528 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 SOX9P48436 509 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 RPS26P62854 115 aaKnown RBP13.91□□□□□ -0.18
SNPH-203ENST00000614659 IRF4Q15306 451 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 LRIT3Q3SXY7 679 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 AGBL5Q8NDL9 886 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 OR5T3Q8NGG3 340 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 ASB15Q8WXK1 588 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 GAL3ST1Q99999 423 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 IER2Q9BTL4 223 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 PLEKHA6Q9Y2H5 1048 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 HS3ST3A1Q9Y663 406 aa13.91□□□□□ -0.18
SNPH-203ENST00000614659 TMEM265A0A087WTH1 108 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 PRSS38A1L453 326 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 FUOMA2VDF0 154 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 C1orf105O95561 183 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 IFNA21P01568 189 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 GKN3PP0CG01 181 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 S1PR1P21453 382 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 RHEBQ15382 184 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 AFMIDQ63HM1 303 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 EPHX3Q9H6B9 360 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 ZNF304Q9HCX3 659 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 RXFP3Q9NSD7 469 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 VILLO15195 856 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 ZNF84P51523 738 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 DEFB134Q4QY38 66 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 LHX8Q68G74 356 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 B3GNT8Q7Z7M8 397 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 RETREG3Q86VR2 466 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 ZNF619Q8N2I2 560 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 SH3YL1Q96HL8 342 aaPredicted RBP13.9□□□□□ -0.18
SNPH-203ENST00000614659 C19orf43Q9BQ61 176 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 CENPMQ9NSP4 180 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 ACTR10Q9NZ32 417 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 OR6C2Q9NZP2 312 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 PCDHGA8Q9Y5G5 932 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.9□□□□□ -0.18
SNPH-203ENST00000614659 PSMD9O00233 223 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 RNF13O43567 381 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 OPRL1P41146 370 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 ARFRP1Q13795 201 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 DEFB133Q30KQ1 61 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 PIAS4Q8N2W9 510 aaPredicted RBP13.9□□□□□ -0.18
SNPH-203ENST00000614659 METTL4Q8N3J2 472 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 ANKK1Q8NFD2 765 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 MYLIPQ8WY64 445 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 METTL8Q9H825 291 aaKnown RBP13.9□□□□□ -0.18
SNPH-203ENST00000614659 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
SNPH-203ENST00000614659 HMX2A2RU54 273 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms