RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PCDHGB3Q9Y5G1 929 aa10.6□□□□□ -0.71
SLIRP-212ENST00000613856 CRYBG3Q68DQ2 2970 aa10.6□□□□□ -0.71
SLIRP-212ENST00000613856 EXPH5Q8NEV8 1989 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 A1L4Q6 167 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 PRAMEF27A3QJZ7 478 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 A8MUA0 341 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 C5orf58C9J3I9 102 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 FKBP6O75344 327 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 PDE9AO76083 593 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 BCHEP06276 602 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 GPIP06744 558 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 GUSBP08236 651 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 UMPSP11172 480 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 HOXB6P17509 224 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 TCN2P20062 427 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 MMP11P24347 488 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 KDELR2P33947 212 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 CLCN2P51788 898 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 GPR143P51810 404 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 CRISP3P54108 245 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 RPS15P62841 145 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 PSPHP78330 225 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 DNASE1L3Q13609 305 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 ZNHIT3Q15649 155 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 DUSP5Q16690 384 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 CRB2Q5IJ48 1285 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 ZNF787Q6DD87 383 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 FAAH2Q6GMR7 532 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 AAGABQ6PD74 315 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 PAPD4Q6PIY7 484 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 CYP2R1Q6VVX0 501 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 PATL1Q86TB9 770 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 SPATA24Q86W54 205 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 SPPL2CQ8IUH8 684 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 IL22RA1Q8N6P7 574 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 CHDHQ8NE62 594 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 B3GNT7Q8NFL0 401 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 BBS10Q8TAM1 723 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 FBXO30Q8TB52 745 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 DOK4Q8TEW6 326 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 XAGE5Q8WWM1 108 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 STMN2Q93045 179 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 NACC2Q96BF6 587 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 SLC35A4Q96G79 324 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 RSRC1Q96IZ7 334 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 BTBD9Q96Q07 612 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 TRNT1Q96Q11 434 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 LPAR4Q99677 370 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 YIPF4Q9BSR8 244 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 BTBD2Q9BX70 525 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 OR8D2Q9GZM6 311 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 DCAF13Q9NV06 445 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 CALML5Q9NZT1 146 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 TCFL5Q9UL49 500 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 FARSAQ9Y285 508 aaKnown RBP10.59□□□□□ -0.71
SLIRP-212ENST00000613856 TP53TG5Q9Y2B4 290 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 PCDHGA6Q9Y5G7 932 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 HS3ST3B1Q9Y662 390 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 MED13Q9UHV7 2174 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 SHANK1Q9Y566 2161 aa10.59□□□□□ -0.71
SLIRP-212ENST00000613856 DSPPQ9NZW4 1301 aa10.58□□□□□ -0.71
SLIRP-212ENST00000613856 DHRS12A0PJE2 317 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 A8MVJ9 347 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 GCM2O75603 506 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-212ENST00000613856 PGM3O95394 542 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 NR2F1P10589 423 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 TRHRP34981 398 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-212ENST00000613856 SOX11P35716 441 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 CRYBA2P53672 197 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 DCAF7P61962 342 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 MRPS22P82650 360 aaKnown RBP10.58□□□□□ -0.72
SLIRP-212ENST00000613856 PSG6Q00889 435 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 PCOLCEQ15113 449 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 EBPQ15125 230 aaKnown RBP10.58□□□□□ -0.72
SLIRP-212ENST00000613856 SYPL1Q16563 259 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 ARHGAP11BQ3KRB8 267 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 AP1ARQ63HQ0 302 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 LRRC74BQ6ZQY2 392 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 CBLL1Q75N03 491 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 C16orf62Q7Z3J2 963 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 ADGRG5Q8IZF4 528 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 COX18Q8N8Q8 333 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 ANKFN1Q8N957 763 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 C17orf47Q8NEP4 570 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 OR8K3Q8NH51 312 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 SLC26A7Q8TE54 656 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 SLC9A6Q92581 669 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 PMM1Q92871 262 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 CDS1Q92903 461 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 OTUB1Q96FW1 271 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-212ENST00000613856 VMP1Q96GC9 406 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 NUDT9Q9BW91 350 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 ITPAQ9BY32 194 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF350Q9GZX5 532 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF700Q9H0M5 742 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 POLE3Q9NRF9 147 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 TUBD1Q9UJT1 453 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 RPS6KA6Q9UK32 745 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 SAMD4AQ9UPU9 718 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms