RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SNRPNP63162 240 aaKnown RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 CEBPEQ15744 281 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 RSBN1Q5VWQ0 802 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 SLC30A6Q6NXT4 461 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 NKAIN4Q8IVV8 208 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 CHAC2Q8WUX2 184 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 OSTF1Q92882 214 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 FAM131CQ96AQ9 280 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 SLC35A4Q96G79 324 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 TM9SF2Q99805 663 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 ANKRD19PQ9H560 264 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 C6orf106Q9H6K1 298 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 KIR3DX1Q9H7L2 352 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 CACYBPQ9HB71 228 aaKnown RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D29Q9UFV1 150 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 NTNG1Q9Y2I2 539 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 GSTK1Q9Y2Q3 226 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 CHST2Q9Y4C5 530 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 PCDHGB2Q9Y5G2 931 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 DUXAA6NLW8 204 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 KDM4EB2RXH2 506 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 LRRTM2O43300 516 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 ZNF888P0CJ79 500 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 IL7P13232 177 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 PPP2CBP62714 309 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 PPP2CAP67775 309 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 RGS1Q08116 209 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 TPBGQ13641 420 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 FAM214AQ32MH5 1076 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 TMEM196Q5HYL7 178 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 LHFPL3Q86UP9 236 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 ACOT11Q8WXI4 607 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 RFKQ969G6 155 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 GIMAP5Q96F15 307 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 SCARF2Q96GP6 870 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 DIRAS2Q96HU8 199 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 MCHR1Q99705 422 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 HOXD1Q9GZZ0 328 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 ISYNA1Q9NPH2 558 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 DZANK1Q9NVP4 752 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 OR6C2Q9NZP2 312 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 PLEKHB1Q9UF11 243 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 PRSS38A1L453 326 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 SMIM30A4D0T7 59 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 GSAPA4D1B5 854 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 POM121BA6NF01 834 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 FABP12A6NFH5 140 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 BTN3A3O00478 584 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 KRT8P05787 483 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 STAT5AP42229 794 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 GPR4P46093 362 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 DAB2P98082 770 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 ZNF544Q6NX49 715 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 SYCE2Q6PIF2 218 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 VN1R4Q7Z5H5 301 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 LRRC25Q8N386 305 aaPredicted RBP16.11■□□□□ 0.17
NEK3-206ENST00000611833 SLC16A11Q8NCK7 471 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 GAL3ST3Q96A11 431 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 NEDD4LQ96PU5 975 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 POLMQ9NP87 494 aaPredicted RBP16.11■□□□□ 0.17
NEK3-206ENST00000611833 SCN3AQ9NY46 2000 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 LINC01565O15544 149 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 ZIC2O95409 532 aaPredicted RBP16.11■□□□□ 0.17
NEK3-206ENST00000611833 EIF2S1P05198 315 aaKnown RBP16.11■□□□□ 0.17
NEK3-206ENST00000611833 CPN2P22792 545 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 AK4P27144 223 aaPredicted RBP16.11■□□□□ 0.17
NEK3-206ENST00000611833 PBX2P40425 430 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 RPS15AP62244 130 aaKnown RBP16.11■□□□□ 0.17
NEK3-206ENST00000611833 SCN1BQ07699 218 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 TAB1Q15750 504 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 DECR1Q16698 335 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 DDI2Q5TDH0 399 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 FAM111BQ6SJ93 734 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 HSDL2Q6YN16 418 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 ASPGQ86U10 573 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 NRMQ8IXM6 262 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 CAMKK1Q8N5S9 505 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 ZFP41Q8N8Y5 198 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 OR7G2Q8NG99 324 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 CDS1Q92903 461 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 SLC41A3Q96GZ6 507 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 MSLNLQ96KJ4 702 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 OR2M4Q96R27 311 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 ARHGAP9Q9BRR9 750 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 NPAP1Q9NZP6 1156 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 ZNF232Q9UNY5 417 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 CLCA2Q9UQC9 943 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 GRIP1Q9Y3R0 1128 aa16.11■□□□□ 0.17
NEK3-206ENST00000611833 A0A1W2PQ09 198 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 TMCC2O75069 709 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 LIMS3P0CW19 117 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 LIMS4P0CW20 117 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 FPR3P25089 353 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 GABRA5P31644 462 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 NR4A2P43354 598 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 CLDN2P57739 230 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 PDZK1Q5T2W1 519 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 ZNF517Q6ZMY9 492 aaPredicted RBP16.1■□□□□ 0.17
NEK3-206ENST00000611833 QSOX2Q6ZRP7 698 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms