RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 MAT2BQ9NZL9 334 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 SELENONQ9NZV5 590 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 OSGIN1Q9UJX0 560 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 CLCA2Q9UQC9 943 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 ERGIC3Q9Y282 383 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 MRPS33Q9Y291 106 aaKnown RBP11.15□□□□□ -0.62
USP6NL-206ENST00000609853 CHST2Q9Y4C5 530 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 TMEM131Q92545 1883 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 ZNF860A6NHJ4 632 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 FAM170BA6NMN3 283 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 B4DGG1 531 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 TPST2O60704 377 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 DNAJB6O75190 326 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 ZIC2O95409 532 aaPredicted RBP11.15□□□□□ -0.63
USP6NL-206ENST00000609853 NADKO95544 446 aaPredicted RBP11.15□□□□□ -0.63
USP6NL-206ENST00000609853 PTHP01270 115 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 ST6GAL1P15907 406 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 SOX18P35713 384 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 AVPR1BP47901 424 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 SNRPNP63162 240 aaKnown RBP11.15□□□□□ -0.63
USP6NL-206ENST00000609853 RACK1P63244 317 aaKnown RBP11.15□□□□□ -0.63
USP6NL-206ENST00000609853 EEF1A1P68104 462 aaKnown RBP11.15□□□□□ -0.63
USP6NL-206ENST00000609853 EFNB1P98172 346 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 MGAT2Q10469 447 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 MAP4K2Q12851 820 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 C1orf61Q13536 156 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 NR1D2Q14995 579 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 SMAD2Q15796 467 aaKnown RBP11.15□□□□□ -0.63
USP6NL-206ENST00000609853 SYT16Q17RD7 645 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 ZSWIM7Q19AV6 140 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 KLHL22Q53GT1 634 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 DCST2Q5T1A1 773 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 GARNL3Q5VVW2 1013 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 C16orf87Q6PH81 154 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 C19orf48Q6RUI8 117 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 MBOAT2Q6ZWT7 520 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 CYP4Z2PQ8N1L4 340 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 CLIP4Q8N3C7 705 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 ARHGEF39Q8N4T4 335 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 CLDN22Q8N7P3 220 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 TCEANCQ8N8B7 351 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 COX18Q8N8Q8 333 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 NELL2Q99435 816 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 ADAP2Q9NPF8 381 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 SEMA4GQ9NTN9 838 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.63
USP6NL-206ENST00000609853 SLC6A14Q9UN76 642 aa11.15□□□□□ -0.63
USP6NL-206ENST00000609853 A0A1W2PR77 199 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 CPSF4LA6NMK7 179 aaKnown RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 M0R129 80 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 KIAA0513O60268 411 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 FOXD2O60548 495 aaPredicted RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 LDB3O75112 727 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 DBTP11182 482 aaKnown RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 RNH1P13489 461 aaKnown RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 NID1P14543 1247 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 TYRP1P17643 537 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 CAPZBP47756 277 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 OMPP47874 163 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 NCS1P62166 190 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 BIKQ13323 160 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 FAM53BQ14153 422 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 LRIT3Q3SXY7 679 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF836Q6ZNA1 936 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 GDPGP1Q6ZNW5 385 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 PRSS41Q7RTY9 318 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 RNF113BQ8IZP6 322 aaKnown RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 ARL14Q8N4G2 192 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 SLC15A4Q8N697 577 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 AMER2Q8N7J2 671 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 PROKR2Q8NFJ6 384 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 WDR36Q8NI36 951 aaKnown RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 ANKRD9Q96BM1 317 aaPredicted RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 SLC41A3Q96GZ6 507 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 SHDQ96IW2 340 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF578Q96N58 590 aaPredicted RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 GAS2L1Q99501 681 aaPredicted RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 MGLLQ99685 303 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 MND1Q9BWT6 205 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 DCSTAMPQ9H295 470 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 MMP27Q9H306 513 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 MED17Q9NVC6 651 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 TVP23BQ9NYZ1 205 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 DOLKQ9UPQ8 538 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 GPR55Q9Y2T6 319 aaPredicted RBP11.14□□□□□ -0.63
USP6NL-206ENST00000609853 SCN2AQ99250 2005 aa11.14□□□□□ -0.63
USP6NL-206ENST00000609853 TTC36A6NLP5 189 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 SGK494L7N484 410 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 CCRL2O00421 344 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 CHST10O43529 356 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 TLX2O43763 284 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 NKX2-2O95096 273 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 PROS1P07225 676 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 IGFBP1P08833 259 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 LSM3P62310 102 aaKnown RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 POU6F2P78424 691 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF91Q05481 1191 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 C1DQ13901 141 aaKnown RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 ZNHIT3Q15649 155 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 SNAPC1Q16533 368 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms