RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 KANK2Q63ZY3 851 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 RNF165Q6ZSG1 346 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 Q6ZSR9 355 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 ZNF551Q7Z340 670 aaPredicted RBP12.02□□□□□ -0.49
TOM1-218ENST00000608674 RNASE6Q93091 150 aaKnown RBP12.02□□□□□ -0.49
TOM1-218ENST00000608674 ZBED6CLQ96FA7 236 aaPredicted RBP12.02□□□□□ -0.49
TOM1-218ENST00000608674 TSSK3Q96PN8 268 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 TUBA1CQ9BQE3 449 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 REEP4Q9H6H4 257 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 EQTNQ9NQ60 294 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 SH3BP4Q9P0V3 963 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 LGALS13Q9UHV8 139 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 FOXD3Q9UJU5 478 aaPredicted RBP12.02□□□□□ -0.49
TOM1-218ENST00000608674 ABCG2Q9UNQ0 655 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 MRPS18CQ9Y3D5 142 aaKnown RBP12.02□□□□□ -0.49
TOM1-218ENST00000608674 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 TRAF6Q9Y4K3 522 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 DNAJC15Q9Y5T4 150 aa12.02□□□□□ -0.49
TOM1-218ENST00000608674 HCFC1P51610 2035 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 MBD3L4A6NDZ8 208 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 MBD3L3A6NE82 208 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 MBD3L5A6NJ08 208 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 EEF1E1-BLOC1S5C9J1V9 151 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 EEF1E1O43324 174 aaKnown RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 KCNH1O95259 989 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 IFI6P09912 130 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 TMIGD3P0DMS9 266 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 PRPS2P11908 318 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 SDC1P18827 310 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 GABRA3P34903 492 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 ASMTP46597 345 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 STARP49675 285 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 AGFG1P52594 562 aaKnown RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 ZNF136P52737 540 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 PRKAG1P54619 331 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 MANFP55145 182 aaKnown RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 GFRA1P56159 465 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 DSCR4P56555 118 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 STX5Q13190 355 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 SNTB1Q13884 538 aaKnown RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 ARL13AQ5H913 290 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 ANKRD26P1Q6NSI1 321 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 EMBQ6PCB8 327 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 CHMP1BQ7LBR1 199 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 SZRD1Q7Z422 152 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 KIF18BQ86Y91 864 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 ZZZ3Q8IYH5 903 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 RELL2Q8NC24 303 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 OR2T11Q8NH01 316 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 CEP70Q8NHQ1 597 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 CLHC1Q8NHS4 586 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 MBD3L2Q8NHZ7 208 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 TWIST2Q8WVJ9 160 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 ZNF764Q96H86 408 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 TM9SF2Q99805 663 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 MECRQ9BV79 373 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 DSN1Q9H410 356 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 TUBB1Q9H4B7 451 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 PTGES2Q9H7Z7 377 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 BAIAP2L1Q9UHR4 511 aa12.01□□□□□ -0.49
TOM1-218ENST00000608674 RPH3AQ9Y2J0 694 aaPredicted RBP12.01□□□□□ -0.49
TOM1-218ENST00000608674 EXPH5Q8NEV8 1989 aa12□□□□□ -0.49
TOM1-218ENST00000608674 TMEM114B3SHH9 223 aa12□□□□□ -0.49
TOM1-218ENST00000608674 TMEM233B4DJY2 109 aa12□□□□□ -0.49
TOM1-218ENST00000608674 LSM1O15116 133 aaKnown RBP12□□□□□ -0.49
TOM1-218ENST00000608674 FADS1O60427 444 aa12□□□□□ -0.49
TOM1-218ENST00000608674 ZIC3O60481 467 aa12□□□□□ -0.49
TOM1-218ENST00000608674 TBX19O60806 448 aa12□□□□□ -0.49
TOM1-218ENST00000608674 PSMG1O95456 288 aa12□□□□□ -0.49
TOM1-218ENST00000608674 IL33O95760 270 aa12□□□□□ -0.49
TOM1-218ENST00000608674 IL18BPO95998 194 aa12□□□□□ -0.49
TOM1-218ENST00000608674 CHRNGP07510 517 aa12□□□□□ -0.49
TOM1-218ENST00000608674 FGF4P08620 206 aa12□□□□□ -0.49
TOM1-218ENST00000608674 CHMP24386 653 aa12□□□□□ -0.49
TOM1-218ENST00000608674 MAPK1P28482 360 aa12□□□□□ -0.49
TOM1-218ENST00000608674 LHX2P50458 406 aa12□□□□□ -0.49
TOM1-218ENST00000608674 GAS1P54826 345 aa12□□□□□ -0.49
TOM1-218ENST00000608674 RFTN2Q52LD8 501 aaPredicted RBP12□□□□□ -0.49
TOM1-218ENST00000608674 R3HCC1LQ7Z5L2 792 aaKnown RBP12□□□□□ -0.49
TOM1-218ENST00000608674 C9orf106Q8NAJ2 232 aa12□□□□□ -0.49
TOM1-218ENST00000608674 AGR3Q8TD06 166 aa12□□□□□ -0.49
TOM1-218ENST00000608674 TCP10LQ8TDR4 215 aa12□□□□□ -0.49
TOM1-218ENST00000608674 GPR151Q8TDV0 419 aa12□□□□□ -0.49
TOM1-218ENST00000608674 RNF138Q8WVD3 245 aa12□□□□□ -0.49
TOM1-218ENST00000608674 WNT2BQ93097 391 aa12□□□□□ -0.49
TOM1-218ENST00000608674 CIDECQ96AQ7 238 aaPredicted RBP12□□□□□ -0.49
TOM1-218ENST00000608674 PPP3R2Q96LZ3 170 aa12□□□□□ -0.49
TOM1-218ENST00000608674 ZFP3Q96NJ6 502 aa12□□□□□ -0.49
TOM1-218ENST00000608674 SH3GL2Q99962 352 aa12□□□□□ -0.49
TOM1-218ENST00000608674 LMF2Q9BU23 707 aaKnown RBP12□□□□□ -0.49
TOM1-218ENST00000608674 TBL1XR1Q9BZK7 514 aa12□□□□□ -0.49
TOM1-218ENST00000608674 ACBD3Q9H3P7 528 aa12□□□□□ -0.49
TOM1-218ENST00000608674 FAM120CQ9NX05 1096 aaKnown RBP12□□□□□ -0.49
TOM1-218ENST00000608674 DNAJB12Q9NXW2 375 aaKnown RBP12□□□□□ -0.49
TOM1-218ENST00000608674 MED11Q9P086 117 aa12□□□□□ -0.49
TOM1-218ENST00000608674 ABCA4P78363 2273 aa11.99□□□□□ -0.49
TOM1-218ENST00000608674 CLCA1A8K7I4 914 aa11.99□□□□□ -0.49
TOM1-218ENST00000608674 PIP5K1BO14986 540 aa11.99□□□□□ -0.49
TOM1-218ENST00000608674 SLU7O95391 586 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms