RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SLC10A6Q3KNW5 377 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 CASP12Q6UXS9 341 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 SLC29A4Q7RTT9 530 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 SIDT2Q8NBJ9 832 aaKnown RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 RNFT2Q96EX2 444 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 LRR1Q96L50 414 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 FN3KQ9H479 309 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 BRD9Q9H8M2 597 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 FZD3Q9NPG1 666 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 HEPACAM2A8MVW5 462 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 TMEM229AB2RXF0 380 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GABRPO00591 440 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 BRINP1O60477 761 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 RECQL4O94761 1208 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 RAB36O95755 333 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 MMP3P08254 477 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 INSRRP14616 1297 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 WARSP23381 471 aaKnown RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 LMO2P25791 158 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 SPAM1P38567 509 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 CD86P42081 329 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GDF5P43026 501 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 CCL23P55773 120 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 MEF2AQ02078 507 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 MAP4K2Q12851 820 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GTF2H2Q13888 395 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 RBM39Q14498 530 aaKnown RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 C4orf46Q504U0 113 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GTF2H2CQ6P1K8 395 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 UNQ6494/PRO21346Q6UXR6 183 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 PRSS45Q7RTY3 260 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 FAM122BQ7Z309 247 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 LRRC28Q86X40 367 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GNPDA2Q8TDQ7 276 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 ART5Q96L15 291 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 OR1F2PQ96R84 312 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 FDXACB1Q9BRP7 624 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 C1QTNF3Q9BXJ4 246 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 BARX1Q9HBU1 254 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 ACSS1Q9NUB1 689 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 DZANK1Q9NVP4 752 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 PLEKHA6Q9Y2H5 1048 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 FNDC3AQ9Y2H6 1198 aaKnown RBP11.83□□□□□ -0.52
CTCFL-218ENST00000608440 AP1M2Q9Y6Q5 423 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 ZNF879B4DU55 563 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 STK25O00506 426 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 HBP1O60381 514 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 HIST1H2ABP04908 130 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 SLC11A2P49281 568 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 DCDP81605 110 aaKnown RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 MAD2L1Q13257 205 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 INTS6LQ5JSJ4 861 aaKnown RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 MRNIPQ6NTE8 343 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 SEZ6L2Q6UXD5 910 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 ANGPTL8Q6UXH0 198 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 PGAP1Q75T13 922 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 HIST3H2AQ7L7L0 130 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 LHFPL3Q86UP9 236 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 TGIF2LXQ8IUE1 241 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 SLITRK4Q8IW52 837 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 CLECL1Q8IZS7 167 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 SLC43A2Q8N370 569 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 ZNF383Q8NA42 475 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 HIST1H2ACQ93077 130 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 SLAMF9Q96A28 289 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 LINGO1Q96FE5 620 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 MOGAT1Q96PD6 335 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 GINS4Q9BRT9 223 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 C16orf70Q9BSU1 422 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 TKTL2Q9H0I9 626 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 TMEM231Q9H6L2 316 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 NMNAT1Q9HAN9 279 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 MED16Q9Y2X0 877 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 MGAMO43451 1857 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 A0A0A6YYC8 382 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 PRAMEF25A6NGN4 478 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 I3L1I5 382 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 CLDN5O00501 218 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 OR2T1O43869 369 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 ULK1O75385 1050 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 HOXB9P17482 250 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 HOXA6P31267 233 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 FGF9P31371 208 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 RAB2AP61019 212 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 RAP2BP61225 183 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 HEPACAMQ14CZ8 416 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 TEX30Q5JUR7 227 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 ATXN7L2Q5T6C5 722 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 CXorf57Q6NSI4 855 aaKnown RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 ESPNLQ6ZVH7 1005 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 CRYBG2Q8N1P7 616 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 TMIEQ8NEW7 156 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 RNASE11Q8TAA1 199 aaKnown RBP11.82□□□□□ -0.52
CTCFL-218ENST00000608440 SOCS4Q8WXH5 440 aa11.82□□□□□ -0.52
CTCFL-218ENST00000608440 THAP4Q8WY91 577 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms