RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 PLOD3O60568 738 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 HCN1O60741 890 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 NME6O75414 186 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-208ENST00000608287 ATP6AP2O75787 350 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 DRD5P21918 477 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 PPICP45877 212 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 ABCE1P61221 599 aaKnown RBP17.54■□□□□ 0.4
SGMS1-208ENST00000608287 RPP38P78345 283 aaKnown RBP17.54■□□□□ 0.4
SGMS1-208ENST00000608287 SORDQ00796 357 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 PLCXD2Q0VAA5 305 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 XKR7Q5GH72 579 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 ANKRD26P1Q6NSI1 321 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 TMEM107Q6UX40 140 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 OMA1Q96E52 524 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 C3orf30Q96M34 536 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 AMDHD1Q96NU7 426 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 SH3GL2Q99962 352 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 GLIPR2Q9H4G4 154 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 REEP4Q9H6H4 257 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 EXO5Q9H790 373 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 PROK2Q9HC23 129 aa17.54■□□□□ 0.4
SGMS1-208ENST00000608287 BOKQ9UMX3 212 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-208ENST00000608287 EXPH5Q8NEV8 1989 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 HRNRQ86YZ3 2850 aaPredicted RBP17.53■□□□□ 0.4
SGMS1-208ENST00000608287 FRG2CA6NGY1 282 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 PPM1BO75688 479 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 BCKDHAP12694 445 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 BGNP21810 368 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 MAPK1P28482 360 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 MC3RP41968 323 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 ASMTP46597 345 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 ATP6AP1LQ52LC2 224 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 Q5PR19 223 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 TBCELQ5QJ74 424 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 HHATQ5VTY9 493 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 BICRALQ6AI39 1079 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 PRSS57Q6UWY2 283 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 KRTAP1-3Q8IUG1 177 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 SPPL2AQ8TCT8 520 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 PPCDCQ96CD2 204 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 FOLH1BQ9HBA9 442 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 ZFP64Q9NPA5 681 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 ALKBH4Q9NXW9 302 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 TAS2R9Q9NYW1 312 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 SH3BP4Q9P0V3 963 aa17.53■□□□□ 0.4
SGMS1-208ENST00000608287 ZNF629Q9UEG4 869 aaPredicted RBP17.53■□□□□ 0.4
SGMS1-208ENST00000608287 GPR55Q9Y2T6 319 aaPredicted RBP17.53■□□□□ 0.4
SGMS1-208ENST00000608287 ANKRD33BA6NCL7 494 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 CLCA1A8K7I4 914 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 PDPK1O15530 556 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 COQ9O75208 318 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 ERN1O75460 977 aaKnown RBP17.52■□□□□ 0.4
SGMS1-208ENST00000608287 SLITRK5O94991 958 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 ABCB1P08183 1280 aaPredicted RBP17.52■□□□□ 0.4
SGMS1-208ENST00000608287 NAGAP17050 411 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 BMP7P18075 431 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 CD53P19397 219 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 BMP5P22003 454 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 GRK2P25098 689 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 SLC1A6P48664 564 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 CORO7P57737 925 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 ZNF155Q12901 538 aaPredicted RBP17.52■□□□□ 0.4
SGMS1-208ENST00000608287 SLC10A1Q14973 349 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 SF3B4Q15427 424 aaKnown RBP eCLIP17.52■□□□□ 0.4
SGMS1-208ENST00000608287 HYAL4Q2M3T9 481 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 LIX1Q8N485 282 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 ZNF781Q8N8C0 355 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 FNDC5Q8NAU1 212 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 CIDECQ96AQ7 238 aaPredicted RBP17.52■□□□□ 0.4
SGMS1-208ENST00000608287 TUBGCP3Q96CW5 907 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 ZNF597Q96LX8 424 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 VSTM2LQ96N03 204 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 RILPQ96NA2 401 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 BTBD9Q96Q07 612 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 PIP5K1AQ99755 562 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 C1orf50Q9BV19 199 aa17.52■□□□□ 0.4
SGMS1-208ENST00000608287 DDX18Q9NVP1 670 aaKnown RBP17.52■□□□□ 0.4
SGMS1-208ENST00000608287 NINQ8N4C6 2090 aa17.52■□□□□ 0.39
SGMS1-208ENST00000608287 TLN2Q9Y4G6 2542 aa17.52■□□□□ 0.39
SGMS1-208ENST00000608287 A0A087WV62 115 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 TMEM120BA0PK00 339 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 LRRC3CA6NJW4 275 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 H7C1Q1 480 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 CELA3AP09093 270 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 CT45A8P0DMV1 189 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 CT45A9P0DMV2 189 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 GPC1P35052 558 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 CASP3P42574 277 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 MAGOHP61326 146 aaKnown RBP17.51■□□□□ 0.39
SGMS1-208ENST00000608287 HSPB3Q12988 150 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 STX3Q13277 289 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 PDCD2Q16342 344 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-208ENST00000608287 ZNF385BQ569K4 471 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 CT45A2Q5DJT8 189 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 C6orf136Q5SQH8 315 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 DESI1Q6ICB0 168 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 ZNF551Q7Z340 670 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-208ENST00000608287 NUP54Q7Z3B4 507 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 PIGTQ969N2 578 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms