RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	P4HA3	Q7Z4N8	544 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	YTHDF3	Q7Z739	585 aa	Known RBP	18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	OR7G2	Q8NG99	324 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	EFHD2	Q96C19	240 aa	Predicted RBP	18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	MED18	Q9BUE0	208 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	BDH2	Q9BUT1	245 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	RTN4R	Q9BZR6	473 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	DSN1	Q9H410	356 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	RNF122	Q9H9V4	155 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF337	Q9Y3M9	751 aa		18.94	■□□□□ 0.62
NECAB3-222	ENST00000607805	IL12B	P29460	328 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	EVI2B	P34910	448 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	CLC	Q05315	142 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	CSTF3	Q12996	717 aa	Known RBP	18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	ERCC6L	Q2NKX8	1250 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	C20orf204	Q6ZNR8	217 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	TAOK1	Q7L7X3	1001 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	SLC44A2	Q8IWA5	706 aa	Predicted RBP	18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	UBQLNL	Q8IYU4	475 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	SAMD14	Q8IZD0	417 aa	Predicted RBP	18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	OR4K17	Q8NGC6	315 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	EXOSC8	Q96B26	276 aa	Known RBP	18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	FAM111A	Q96PZ2	611 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	CCL19	Q99731	98 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	PIGQ	Q9BRB3	760 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	UBTD1	Q9HAC8	227 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	SLC35C2	Q9NQQ7	365 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF175	Q9Y473	711 aa		18.93	■□□□□ 0.62
NECAB3-222	ENST00000607805	C16orf97	H3BN30	126 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	POU2F1	P14859	743 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	KRT20	P35900	424 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	SERPINB9	P50453	376 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	MRPS22	P82650	360 aa	Known RBP	18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	OCRL	Q01968	901 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	PRSS53	Q2L4Q9	553 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	GALNT18	Q6P9A2	607 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF550	Q7Z398	422 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	MEIOB	Q8N635	442 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	CDYL2	Q8N8U2	506 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	C16orf78	Q8WTQ4	265 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	MTBP	Q96DY7	904 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF845	Q96IR2	970 aa	Predicted RBP	18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	PAFAH2	Q99487	392 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	ACPT	Q9BZG2	426 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	GSX2	Q9BZM3	304 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	STMN4	Q9H169	189 aa	Predicted RBP	18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	TAS2R9	Q9NYW1	312 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	PPP4R1L	Q9P1A2	415 aa		18.92	■□□□□ 0.62
NECAB3-222	ENST00000607805	OR2M5	A3KFT3	312 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	TRIM64	A6NGJ6	449 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	TRIM64B	A6NI03	449 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	LINC01387	J3KSC0	135 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	PCDH7	O60245	1069 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	PSMG1	O95456	288 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	ESRRB	O95718	433 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	INHBA	P08476	426 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	PAX1	P15863	534 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	CLDN20	P56880	219 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	EEFSEC	P57772	596 aa	Known RBP	18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	GANAB	Q14697	944 aa	Known RBP	18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	UNC50	Q53HI1	259 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	CHMP1B	Q7LBR1	199 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF610	Q8N9Z0	462 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	FNDC9	Q8TBE3	224 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	DCAKD	Q8WVC6	231 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	CAVIN3	Q969G5	261 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	APIP	Q96GX9	242 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF382	Q96SR6	550 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	SLC39A3	Q9BRY0	314 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	PINK1	Q9BXM7	581 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	CDC42EP4	Q9H3Q1	356 aa	Known RBP	18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	PFDN4	Q9NQP4	134 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	SIRT5	Q9NXA8	310 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	FLRT3	Q9NZU0	649 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	MED11	Q9P086	117 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	ABCG2	Q9UNQ0	655 aa		18.91	■□□□□ 0.62
NECAB3-222	ENST00000607805	MYO1G	B0I1T2	1018 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	SCO2	O43819	266 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	KRT6A	P02538	564 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	KRT6B	P04259	564 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	THBD	P07204	575 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	HK1	P19367	917 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	KRT6C	P48668	564 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	HTR6	P50406	440 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	SIRPA	P78324	504 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	FGFBP1	Q14512	234 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	RASA2	Q15283	850 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	TMEM44	Q2T9K0	475 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	CYP27C1	Q4G0S4	372 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF678	Q5SXM1	525 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	FAM9C	Q8IZT9	166 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	METTL25	Q8N6Q8	603 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	UHMK1	Q8TAS1	419 aa	Known RBP	18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	PERP	Q96FX8	193 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	SHCBP1L	Q9BZQ2	653 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	ZNF180	Q9UJW8	692 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805	ALPK2	Q86TB3	2170 aa		18.9	■□□□□ 0.62
NECAB3-222	ENST00000607805		A0A087WV62	115 aa		18.89	■□□□□ 0.61
NECAB3-222	ENST00000607805	TRIM49D1	C9J1S8	452 aa		18.89	■□□□□ 0.61
NECAB3-222	ENST00000607805	SMAD7	O15105	426 aa	Known RBP	18.89	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms