RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 A0A0U1RQS6 177 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 NKX6-3A6NJ46 265 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 DNPH1O43598 174 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 CNIH1O95406 144 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ADAP00813 363 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 THBS1P07996 1170 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PTPRAP18433 802 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 TBXA2RP21731 343 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 LHCGRP22888 699 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 SERPINA4P29622 427 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ERP29P30040 261 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ARR3P36575 388 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 GRIA1P42261 906 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 SRP9P49458 86 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PRKXP51817 358 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 TIRAPP58753 221 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 E2F1Q01094 437 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 SKP2Q13309 424 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 EIF4EBP2Q13542 120 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 CAMK1Q14012 370 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ARHGEF7Q14155 803 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 CTTNQ14247 550 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 OR4D1Q15615 310 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PROX2Q3B8N5 592 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 LHX8Q68G74 356 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 C11orf63Q6NUN7 778 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PRSS55Q6UWB4 352 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 C17orf99Q6UX52 265 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ZNF562Q6V9R5 426 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 TRIM46Q7Z4K8 759 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ARPINQ7Z6K5 226 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 NLRX1Q86UT6 975 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 STK35Q8TDR2 534 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 COL21A1Q96P44 957 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 UBL7Q96S82 380 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 CD180Q99467 661 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PRMT1Q99873 361 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PCGF1Q9BSM1 259 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 SMG9Q9H0W8 520 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 WDR54Q9H977 334 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 GFOD1Q9NXC2 390 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 SEC14L3Q9UDX4 400 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 FBXL4Q9UKA2 621 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 NENFQ9UMX5 172 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 CDRT15L2A8MXV6 281 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 H3BNX3 289 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 MKRN2OSH3BPM6 223 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 CYP26A1O43174 497 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 BNIP3LO60238 219 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 LEFTY1O75610 366 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 SOX30O94993 753 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 FTLP02792 175 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ARG1P05089 322 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 TATP17735 454 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PRDX5P30044 214 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 OTX2P32243 289 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PBX1P40424 430 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 GMPSP49915 693 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 RAG2P55895 527 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 MTM1Q13496 603 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 BSXQ3C1V8 233 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 SPOUT1Q5T280 376 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PLET1Q6UQ28 207 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 CACUL1Q86Y37 369 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 FAM219AQ8IW50 185 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 C17orf78Q8N4C9 275 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 KBTBD8Q8NFY9 601 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 OR13D1Q8NGV5 346 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 ELMOD3Q96FG2 381 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 PEX11GQ96HA9 241 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 AKR1E2Q96JD6 320 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 HRASLS5Q96KN8 279 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 GLT1D1Q96MS3 346 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 DCLRE1CQ96SD1 692 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 IL22Q9GZX6 179 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 BCO1Q9HAY6 547 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 HMG20AQ9NP66 347 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 LHX9Q9NQ69 397 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 MARCH4Q9P2E8 410 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 KLHL21Q9UJP4 597 aa5.46□□□□□ -1.54
COL4A3BP-207ENST00000604926 WDR81Q562E7 1941 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 IGLON5A6NGN9 336 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 PRR33A8MZF0 331 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 DLX3O60479 287 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 MRPS14O60783 128 aaKnown RBP5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 AQP8O94778 261 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 GADD45GO95257 159 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 NDUFA10O95299 355 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 CELF2O95319 508 aaKnown RBP5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 CCNE2O96020 404 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 CETPP11597 493 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 ANXA3P12429 323 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 IMPDH1P20839 514 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 AZGP1P25311 298 aaKnown RBP5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 SNU13P55769 128 aaKnown RBP5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 SEC61GP60059 68 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 UBE2KP61086 200 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 RPL26P61254 145 aaKnown RBP5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 PITPNAQ00169 270 aa5.45□□□□□ -1.54
COL4A3BP-207ENST00000604926 BIKQ13323 160 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms