RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 EFHD2Q96C19 240 aaPredicted RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 RMND5BQ96G75 393 aaPredicted RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 SLC35G5Q96KT7 338 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 OR7D2Q96RA2 312 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 PAIP1Q9H074 479 aaKnown RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 SLC6A13Q9NSD5 602 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 ABCG2Q9UNQ0 655 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 GMEB1Q9Y692 573 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 A0A0G2JMM0 328 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 A0A1W2PPB8 328 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 A0A1W2PRS3 328 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 KIR3DP1A8MWS1 328 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 ICOSLGO75144 302 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 TRIM3O75382 744 aaPredicted RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 GLSO94925 669 aaPredicted RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 ANP32DO95626 131 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 IGKV1D-16P01601 117 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 GSNP06396 782 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 NGFRP08138 427 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 GUSBP08236 651 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 CYP4B1P13584 511 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 KHKP50053 298 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 GPR85P60893 370 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 RPS26P62854 115 aaKnown RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 KCNJ2P63252 427 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 SF3A3Q12874 501 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF40-212ENST00000602784 KLF10Q13118 480 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 SLC2A7Q6PXP3 512 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 PIGWQ7Z7B1 504 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 CHDHQ8NE62 594 aaPredicted RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 FBXO30Q8TB52 745 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 NR4A3Q92570 626 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 CDS1Q92903 461 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 MIB2Q96AX9 1013 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 NODALQ96S42 347 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 SLX1AQ9BQ83 275 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 DOHHQ9BU89 302 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 NMUR2Q9GZQ4 415 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 FAM107BQ9H098 131 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 SERHL2Q9H4I8 314 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 METTL7AQ9H8H3 244 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 TPT1P8Q9HAU6 139 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 IL1RL2Q9HB29 575 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 HHATLQ9HCP6 504 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 ZFP64Q9NPA5 681 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 OLAHQ9NV23 265 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 EXD2Q9NVH0 621 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 LEF1Q9UJU2 399 aaPredicted RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 BOKQ9UMX3 212 aaPredicted RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 NDUFAF1Q9Y375 327 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 PCDHB14Q9Y5E9 798 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.72□□□□□ -0.37
RNF40-212ENST00000602784 NBASA2RRP1 2371 aa12.72□□□□□ -0.37
RNF40-212ENST00000602784 EML6Q6ZMW3 1958 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 PINLYPA6NC86 204 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 G3V3Y1 287 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 ANGPT2O15123 496 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 FADS1O60427 444 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 SHOX2O60902 331 aaPredicted RBP12.71□□□□□ -0.37
RNF40-212ENST00000602784 CD1EP15812 388 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 ZNF24P17028 368 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 TBXA2RP21731 343 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.37
RNF40-212ENST00000602784 DNASE1L1P49184 302 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 FOXK1P85037 733 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 PMP22Q01453 160 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 ALDH6A1Q02252 535 aaKnown RBP12.71□□□□□ -0.37
RNF40-212ENST00000602784 UBAP2LQ14157 1087 aaKnown RBP12.71□□□□□ -0.37
RNF40-212ENST00000602784 MAPRE2Q15555 327 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 ARHGAP11BQ3KRB8 267 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 KRTCAP3Q53RY4 240 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 COQ5Q5HYK3 327 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 PAGE3Q5JUK9 113 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 RNFT1Q5M7Z0 435 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 DCST2Q5T1A1 773 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 ATAD3BQ5T9A4 648 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 PRAMEF20Q5VT98 475 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 DESI1Q6ICB0 168 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 HEPHL1Q6MZM0 1159 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 SLC22A16Q86VW1 577 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 SIAH3Q8IW03 269 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 TMEM41AQ96HV5 264 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 SDF2Q99470 211 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 HOXD1Q9GZZ0 328 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 OR51I1Q9H343 314 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 UBQLN4Q9NRR5 601 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 THUMPD1Q9NXG2 353 aaKnown RBP12.71□□□□□ -0.37
RNF40-212ENST00000602784 TUBA8Q9NY65 449 aaPredicted RBP12.71□□□□□ -0.37
RNF40-212ENST00000602784 KCNE3Q9Y6H6 103 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 CAPN7Q9Y6W3 813 aa12.71□□□□□ -0.37
RNF40-212ENST00000602784 SHANK1Q9Y566 2161 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 TRBV5-3A0A0A0MS03 114 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 ACOT7O00154 380 aa12.7□□□□□ -0.38
RNF40-212ENST00000602784 HMGN4O00479 90 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms