RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CIDECQ96AQ7 238 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF436Q9C0F3 470 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-217ENST00000602723 MVB12BQ9H7P6 319 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 ABRACLQ9P1F3 81 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 RFPL3O75679 317 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 C1GALT1C1LP0DN25 315 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SPRYD7Q5W111 196 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SMOQ99835 787 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 FEZF1A0PJY2 475 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 TRAPPC13A5PLN9 417 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 GGT3PA6NGU5 568 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 PRAMEF2O60811 474 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 HOXB2P14652 356 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 TAS2R20P59543 309 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SLC35F2Q8IXU6 374 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SUMF2Q8NBJ7 301 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 OR51D1Q8NGF3 324 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 OR4K13Q8NH42 304 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 FNDC9Q8TBE3 224 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF689Q96CS4 500 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-217ENST00000602723 MMP28Q9H239 520 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 NME7Q9Y5B8 376 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 AK1P00568 194 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 FBLP22087 321 aaKnown RBP9.13□□□□□ -0.95
CSMD1-217ENST00000602723 TAS2R38P59533 333 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 FAM83FQ8NEG4 500 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-217ENST00000602723 HAS2Q92819 552 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SLAMF9Q96A28 289 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SLC41A3Q96GZ6 507 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SLC6A5Q9Y345 797 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SNAPINO95295 136 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 GSRP00390 522 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 ADAP00813 363 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 PRKACBP22694 351 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 SLC2A5P22732 501 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 HNF1BP35680 557 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 RRAS2P62070 204 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-217ENST00000602723 DCST2Q5T1A1 773 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 C14orf80Q86SX3 495 aa9.13□□□□□ -0.95
CSMD1-217ENST00000602723 KCNE1P15382 129 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 KDELR2P33947 212 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 HOXD13P35453 343 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 WNT4P56705 351 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 FXYD4P59646 89 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 NKX3-2P78367 333 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 OR4D1Q15615 310 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 PLAG1Q6DJT9 500 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 MRPL41Q8IXM3 137 aaKnown RBP9.12□□□□□ -0.95
CSMD1-217ENST00000602723 REM2Q8IYK8 340 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-217ENST00000602723 TMEM175Q9BSA9 504 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ANKRD60Q9BZ19 345 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 GMEB2Q9UKD1 530 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 SULT1C2O00338 296 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 LCKP06239 509 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 FDXRP22570 491 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 GKP32189 559 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 RCAN2Q14206 197 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 TMEM150AQ86TG1 271 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 B4GALT6Q9UBX8 382 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 KRBA1A5PL33 1030 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ARRB1P49407 418 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-217ENST00000602723 SVBPQ8N300 66 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 GPRC5BQ9NZH0 403 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 IL20RAQ9UHF4 553 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 LAMB1P07942 1786 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 TGM6O95932 706 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 TMEM225BP0DP42 221 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ETFAP13804 333 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 RAB5CP51148 216 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 OR51T1Q8NGJ9 327 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 C16orf78Q8WTQ4 265 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 SAMD10Q9BYL1 202 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 MPPED1O15442 326 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ACTL6BO94805 426 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ALDOBP05062 364 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 CNR2P34972 360 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 MICAQ29983 383 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 SYT3Q9BQG1 590 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 PELOQ9BRX2 385 aaKnown RBP9.12□□□□□ -0.95
CSMD1-217ENST00000602723 BCAS3Q9H6U6 928 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 GCM1Q9NP62 436 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 PCYT1BQ9Y5K3 369 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-217ENST00000602723 TRAV18A0A075B6X5 111 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 FAM221BA6H8Z2 402 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 AKAIN1P0CW23 69 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 IRF2P14316 349 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 CLDN8P56748 225 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 GPM6BQ13491 265 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 UBE2NLQ5JXB2 153 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 MAMDC2Q7Z304 686 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-217ENST00000602723 GPR137CQ8N3F9 429 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 DBF4BQ8NFT6 615 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 FRS2Q8WU20 508 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 PPA2Q9H2U2 334 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ARMC1Q9NVT9 282 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ATG4BQ9Y4P1 393 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 INHAP05111 366 aa9.12□□□□□ -0.95
CSMD1-217ENST00000602723 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms