RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ZIC2O95409 532 aaPredicted RBP16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 HTR1AP08908 422 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 TFPTP0C1Z6 253 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 DCTP40126 519 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 KCNAB2Q13303 367 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 MEP1AQ16819 746 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 C3orf38Q5JPI3 329 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 BPHLQ86WA6 291 aaPredicted RBP16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 LGI4Q8N135 537 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 GALNT6Q8NCL4 622 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 OR5K1Q8NHB7 308 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 MIPOL1Q8TD10 442 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 RAB2BQ8WUD1 216 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 PTPMT1Q8WUK0 201 aaPredicted RBP16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 BORCS5Q969J3 196 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 ABTB1Q969K4 478 aaPredicted RBP16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 RBM18Q96H35 190 aaKnown RBP16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 SPSB2Q99619 263 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 TGIF2Q9GZN2 237 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 FOXJ2Q9P0K8 574 aa16.13■□□□□ 0.17
PPFIA3-207ENST00000602716 IGHV3-20A0A0C4DH32 117 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 C9orf172C9J069 976 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 CHRM4P08173 479 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 HOXB6P17509 224 aaKnown RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 KDELR2P33947 212 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 PCBP3P57721 371 aaKnown RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 NHLH1Q02575 133 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 MAP4K2Q12851 820 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 VEZF1Q14119 521 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 DUSP5Q16690 384 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 ANKDD1AQ495B1 522 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 EXOSC6Q5RKV6 272 aaKnown RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 MLIPQ5VWP3 458 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 LAIR2Q6ISS4 152 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 OVCH1Q7RTY7 1134 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 VTCN1Q7Z7D3 282 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 EID3Q8N140 333 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 SLC9A6Q92581 669 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 CDS1Q92903 461 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 POP5Q969H6 163 aaKnown RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 TAMM41Q96BW9 452 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 PPP1R14BQ96C90 147 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 SLC35A4Q96G79 324 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 DEPDC7Q96QD5 511 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 ACTRT3Q9BYD9 372 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 GPN2Q9H9Y4 310 aaPredicted RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 RIF1Q5UIP0 2472 aaKnown RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 VSTM2BA6NLU5 285 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 C17orf105B2RV13 164 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 DLL1O00548 723 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 PRKNO60260 465 aaPredicted RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 ONECUT2O95948 504 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 HBQ1P09105 142 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 ZNF182P17025 639 aaPredicted RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 TPD52P55327 224 aaPredicted RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 CD47Q08722 323 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 SERTAD2Q14140 314 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 NSDHLQ15738 373 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 MOGQ16653 247 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 ZNF630Q2M218 657 aaPredicted RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 BHLHB9Q6PI77 547 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 BPIFB6Q8NFQ5 453 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 TBC1D23Q9NUY8 699 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 FAIMQ9NVQ4 179 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 TBCCD1Q9NVR7 557 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 AKAP7Q9P0M2 348 aaPredicted RBP16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 BLOC1S6Q9UL45 172 aa16.12■□□□□ 0.17
PPFIA3-207ENST00000602716 PCNX2A6NKB5 2137 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 IDSB3KWA1 339 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 PLD2O14939 933 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 SLC28A2O43868 658 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 STK17BO94768 372 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 ZNF682O95780 498 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 JMJD7P0C870 316 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 EMDP50402 254 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 LIMK1P53667 647 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 OCA2Q04671 838 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 RBBP4Q09028 425 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 ZNF155Q12901 538 aaPredicted RBP16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 TOP3AQ13472 1001 aaPredicted RBP16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 CYP27C1Q4G0S4 372 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 CDC73Q6P1J9 531 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 MRPL14Q6P1L8 145 aaKnown RBP16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 MR1Q95460 341 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 TMEFF2Q9UIK5 374 aaPredicted RBP16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 C3orf18Q9UK00 162 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 SATB2Q9UPW6 733 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 CCDC187A0A096LP49 1063 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 LOC100130705A0A1B0GUX0 176 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 HS6ST1O60243 411 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 PRKACGP22612 351 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 ISL1P61371 349 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 PPP1R8Q12972 351 aaKnown RBP16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 NNATQ16517 81 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 CCNJQ5T5M9 372 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 DCAF12Q5T6F0 453 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 ZNF691Q5VV52 312 aa16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 TIPARPQ7Z3E1 657 aaKnown RBP16.11■□□□□ 0.17
PPFIA3-207ENST00000602716 PIK3R3Q92569 461 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms