RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 LARP4Q71RC2 724 aaKnown RBP eCLIP16.39■□□□□ 0.21
IRF3-231ENST00000602190 PPM1NQ8N819 430 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 MAPK1IP1LQ8NDC0 245 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 OR4K17Q8NGC6 315 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 TMEM158Q8WZ71 300 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 C1GALT1C1Q96EU7 318 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 PLPPR2Q96GM1 343 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 ADGRG7Q96K78 797 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 DSN1Q9H410 356 aa16.39■□□□□ 0.21
IRF3-231ENST00000602190 A0A096LNT2 108 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 STX16-NPEPL1H3BU86 382 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 STX16O14662 325 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 NME6O75414 186 aaPredicted RBP16.38■□□□□ 0.21
IRF3-231ENST00000602190 IFNA2P01563 188 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 GUCY2DQ02846 1103 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 ZNF844Q08AG5 666 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 FAM180BQ6P0A1 224 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 CTAGE3PQ8IX95 158 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 OR4N2Q8NGD1 307 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 GMPPAQ96IJ6 420 aaPredicted RBP16.38■□□□□ 0.21
IRF3-231ENST00000602190 NSUN5Q96P11 429 aaKnown RBP16.38■□□□□ 0.21
IRF3-231ENST00000602190 KLHL4Q9C0H6 718 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 FOLH1BQ9HBA9 442 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 AP4B1Q9Y6B7 739 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 FREM1Q5H8C1 2179 aa16.38■□□□□ 0.21
IRF3-231ENST00000602190 PSMG1O95456 288 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 ALDOAP04075 364 aaKnown RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 SOD3P08294 240 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 RPS17P08708 135 aaKnown RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 HK1P19367 917 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 IL12BP29460 328 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 SLC6A8P48029 635 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 CCNG1P51959 295 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 MRPS22P82650 360 aaKnown RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 VEZF1Q14119 521 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 CTU2Q2VPK5 515 aaKnown RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 RAET1LQ5VY80 246 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 SEZ6L2Q6UXD5 910 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 PTGR2Q8N8N7 351 aaPredicted RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 AKAP1Q92667 903 aaKnown RBP eCLIP16.37■□□□□ 0.21
IRF3-231ENST00000602190 GFM2Q969S9 779 aaKnown RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 C11orf24Q96F05 449 aaPredicted RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 ERP44Q9BS26 406 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 GRIP2Q9C0E4 1043 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 SLCO5A1Q9H2Y9 848 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 FARSBQ9NSD9 589 aaKnown RBP16.37■□□□□ 0.21
IRF3-231ENST00000602190 PPP4R1LQ9P1A2 415 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 ZNF225Q9UK10 706 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 UTS2RQ9UKP6 389 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 GPR52Q9Y2T5 361 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 ZNF780BQ9Y6R6 833 aa16.37■□□□□ 0.21
IRF3-231ENST00000602190 SEC14L5O43304 696 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 TCEA1P23193 301 aaKnown RBP16.36■□□□□ 0.21
IRF3-231ENST00000602190 IDUAP35475 653 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 MAGEA12P43365 314 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 RPS3AP61247 264 aaKnown RBP16.36■□□□□ 0.21
IRF3-231ENST00000602190 IFT88Q13099 833 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 CCDC116Q8IYX3 515 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 OR4F6Q8NGB9 312 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 OR9A2Q8NGT5 310 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 RAB3IL1Q8TBN0 382 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 FBF1Q8TES7 1133 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 EFHD2Q96C19 240 aaPredicted RBP16.36■□□□□ 0.21
IRF3-231ENST00000602190 FAIM2Q9BWQ8 316 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 C1QTNF3Q9BXJ4 246 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 ACTR6Q9GZN1 396 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 STMN4Q9H169 189 aaPredicted RBP16.36■□□□□ 0.21
IRF3-231ENST00000602190 FAM120CQ9NX05 1096 aaKnown RBP16.36■□□□□ 0.21
IRF3-231ENST00000602190 MED11Q9P086 117 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 SLC12A4Q9UP95 1085 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 LAMP3Q9UQV4 416 aa16.36■□□□□ 0.21
IRF3-231ENST00000602190 A0A096LPK6 155 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 PDYNP01213 254 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 STX2P32856 288 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 CYP27C1Q4G0S4 372 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 LETMD1Q6P1Q0 360 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 SAMD14Q8IZD0 417 aaPredicted RBP16.35■□□□□ 0.21
IRF3-231ENST00000602190 PLD6Q8N2A8 252 aaKnown RBP16.35■□□□□ 0.21
IRF3-231ENST00000602190 OR7G2Q8NG99 324 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 UHMK1Q8TAS1 419 aaKnown RBP16.35■□□□□ 0.21
IRF3-231ENST00000602190 KAT2AQ92830 837 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 SHCBP1LQ9BZQ2 653 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 LRTM1Q9HBL6 345 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 FLRT3Q9NZU0 649 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 CPSF2Q9P2I0 782 aaKnown RBP16.35■□□□□ 0.21
IRF3-231ENST00000602190 MCM8Q9UJA3 840 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 EMC9Q9Y3B6 208 aa16.35■□□□□ 0.21
IRF3-231ENST00000602190 PLCE1Q9P212 2302 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 FAM187AA6NFU0 413 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 H3BML4 177 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 SCO2O43819 266 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 GCM2O75603 506 aaPredicted RBP16.34■□□□□ 0.21
IRF3-231ENST00000602190 IGHV4-39P01824 125 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 ZNF17P17021 662 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 PSMA4P25789 261 aaKnown RBP16.34■□□□□ 0.21
IRF3-231ENST00000602190 KRT20P35900 424 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 ERCC6LQ2NKX8 1250 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 NCMAPQ5T1S8 102 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 BEND4Q6ZU67 534 aa16.34■□□□□ 0.21
IRF3-231ENST00000602190 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms