RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 CCDC116Q8IYX3 515 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 NFKBIDQ8NI38 313 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 ZNF681Q96N22 645 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 COPS4Q9BT78 406 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 MROQ9BYG7 248 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 SLC7A5P2Q9GIP4 190 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 GLIPR2Q9H4G4 154 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 CNOT2Q9NZN8 540 aaKnown RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 AKAP7Q9P0M2 348 aaPredicted RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 DHCR7Q9UBM7 475 aaKnown RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 SNX8Q9Y5X2 465 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 MUC6Q6W4X9 2439 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 FAM227AF5H4B4 570 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 CLDN4O14493 209 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 GDF9O60383 454 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 GPR75O95800 540 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 C8orf89P0DMQ9 161 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 PSMB9P28065 219 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 PPP2R1BP30154 601 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 CCKBRP32239 447 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 SOAT1P35610 550 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 TGFBR2P37173 567 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 OPRL1P41146 370 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 XKP51811 444 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 PDX1P52945 283 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 MLLT10P55197 1068 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 MAT1AQ00266 395 aaKnown RBP10.92□□□□□ -0.66
VRK3-223ENST00000601341 CCDC157Q569K6 752 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 STPG1Q5TH74 334 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 PRAMEF17Q5VTA0 474 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 ANGPTL8Q6UXH0 198 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 IGFN1Q86VF2 1251 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 PPP1R3BQ86XI6 285 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 RNF130Q86XS8 419 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 ZNF595Q8IYB9 648 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 LGI4Q8N135 537 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 CENPSQ8N2Z9 138 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 LRRC25Q8N386 305 aaPredicted RBP10.92□□□□□ -0.66
VRK3-223ENST00000601341 SLC5A8Q8N695 610 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 METTL27Q8N6F8 245 aaPredicted RBP10.92□□□□□ -0.66
VRK3-223ENST00000601341 OR6Q1Q8NGQ2 317 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 OR51Q1Q8NH59 317 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 SUN3Q8TAQ9 357 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 ABTB1Q969K4 478 aaPredicted RBP10.92□□□□□ -0.66
VRK3-223ENST00000601341 LGALS12Q96DT0 336 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 PEX11GQ96HA9 241 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 COL21A1Q96P44 957 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 RACGAP1Q9H0H5 632 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 SEMA3GQ9NS98 782 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 ACER3Q9NUN7 267 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 OCIAD1Q9NX40 245 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 OSGIN1Q9UJX0 560 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 MAP4K5Q9Y4K4 846 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 PCDHGA1Q9Y5H4 931 aa10.92□□□□□ -0.66
VRK3-223ENST00000601341 EP300Q09472 2414 aaPredicted RBP10.91□□□□□ -0.66
VRK3-223ENST00000601341 SCN3AQ9NY46 2000 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 EFCAB10A6NFE3 127 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 EFCAB7A8K855 629 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 AGRPO00253 132 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 SCRG1O75711 98 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 FADS2O95864 444 aaKnown RBP10.91□□□□□ -0.66
VRK3-223ENST00000601341 IFNW1P05000 195 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 HBQ1P09105 142 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 ALOX5P09917 674 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 PIPP12273 146 aaPredicted RBP10.91□□□□□ -0.66
VRK3-223ENST00000601341 CPMP14384 443 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 PORP16435 677 aaPredicted RBP10.91□□□□□ -0.66
VRK3-223ENST00000601341 CBLP22681 906 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 CD40LGP29965 261 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 AQP1P29972 269 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 GPC1P35052 558 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 MAP2K4P45985 399 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 SMIM11AP58511 58 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 CDC42P60953 191 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 SPIBQ01892 262 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 DSG2Q14126 1118 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 ZNF750Q32MQ0 723 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 SPDYE7PQ495Y7 208 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 COLEC12Q5KU26 742 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 RHBDD2Q6NTF9 364 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 AHSA2Q719I0 299 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 PIP4P1Q86T03 277 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 TMCO5AQ8N6Q1 288 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 TMEM52Q8NDY8 209 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 APOBEC4Q8WW27 367 aaKnown RBP10.91□□□□□ -0.66
VRK3-223ENST00000601341 COL26A1Q96A83 441 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 ITPKCQ96DU7 683 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 DHRS1Q96LJ7 313 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 CDCA4Q9BXL8 241 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 MMP27Q9H306 513 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 CXorf36Q9H7Y0 433 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 ZNF304Q9HCX3 659 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 TESMINQ9Y4I5 508 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 TMEM184BQ9Y519 407 aaPredicted RBP10.91□□□□□ -0.66
VRK3-223ENST00000601341 CORINQ9Y5Q5 1042 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 MAU2Q9Y6X3 613 aa10.91□□□□□ -0.66
VRK3-223ENST00000601341 hCG_2014768A0A024R1R8 64 aa10.9□□□□□ -0.66
VRK3-223ENST00000601341 EFCAB9A8MZ26 197 aa10.9□□□□□ -0.66
VRK3-223ENST00000601341 POLR1CO15160 346 aaPredicted RBP10.9□□□□□ -0.66
VRK3-223ENST00000601341 FGF17O60258 216 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms