RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 SNPHO15079 494 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 DIAPH2O60879 1101 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 TGDSO95455 350 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 HMGN2P05204 90 aaKnown RBP15.4■□□□□ 0.06
TRIM28-215ENST00000601150 TPOP07202 933 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 IDO1P14902 403 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 S100A3P33764 101 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 SOAT1P35610 550 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 MAN2A2P49641 1150 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 NME5P56597 212 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 UFM1P61960 85 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 TP53BP2Q13625 1128 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 ANXA8L1Q5VT79 327 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 MTFR2Q6P444 385 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 EPGNQ6UW88 154 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 DOLPP1Q86YN1 238 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 CLECL1Q8IZS7 167 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 SLC16A11Q8NCK7 471 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 FBXO30Q8TB52 745 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 RNF138Q8WVD3 245 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 CKAP2Q8WWK9 683 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 PIK3R3Q92569 461 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 JADE3Q92613 823 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 RMND5BQ96G75 393 aaPredicted RBP15.4■□□□□ 0.06
TRIM28-215ENST00000601150 C16orf58Q96GQ5 468 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 MAGEB18Q96M61 343 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 GNRHR2Q96P88 292 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 OR52B2Q96RD2 323 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 ZBTB18Q99592 522 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 YIPF4Q9BSR8 244 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 PCDHGB4Q9UN71 923 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 WIF1Q9Y5W5 379 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 PTPN13Q12923 2485 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 PRSS51A0A1B0GVH4 220 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 KRT16P08779 473 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 ESRRAP11474 423 aaPredicted RBP15.39■□□□□ 0.05
TRIM28-215ENST00000601150 PTPN6P29350 595 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 RFX3P48380 749 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 PHC1P78364 1004 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 LASP1Q14847 261 aaKnown RBP15.39■□□□□ 0.05
TRIM28-215ENST00000601150 TOMM20Q15388 145 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 DUSP5Q16690 384 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 GSTA3Q16772 222 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 FAM174BQ3ZCQ3 159 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 SPANXN4Q5MJ08 99 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 EXOSC6Q5RKV6 272 aaKnown RBP15.39■□□□□ 0.05
TRIM28-215ENST00000601150 BHLHB9Q6PI77 547 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 CD163Q86VB7 1156 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 EID3Q8N140 333 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 COX18Q8N8Q8 333 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 OR4A15Q8NGL6 344 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 TEX37Q96LM6 180 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 PSMG3-AS1Q96PY0 264 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 STACQ99469 402 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 ACTRT3Q9BYD9 372 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 SLC6A15Q9H2J7 730 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 UBQLN3Q9H347 655 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 FAM120CQ9NX05 1096 aaKnown RBP15.39■□□□□ 0.05
TRIM28-215ENST00000601150 FAF1Q9UNN5 650 aaPredicted RBP15.39■□□□□ 0.05
TRIM28-215ENST00000601150 ABCG2Q9UNQ0 655 aa15.39■□□□□ 0.05
TRIM28-215ENST00000601150 UQCRHLA0A096LP55 91 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 NPIPA2E9PIF3 369 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 NPIPA3F8WFD2 350 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 BCKDKO14874 412 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 UBDO15205 165 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 FADS1O60427 444 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 ZG16O60844 167 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 SCN2BO60939 215 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 TRAPPC6AO75865 159 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 SOX30O94993 753 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 UTS2O95399 124 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 IGKV1D-16P01601 117 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 HPNP05981 417 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 EVI2BP34910 448 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 TRPC1P48995 793 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 CLK3P49761 638 aaKnown RBP15.38■□□□□ 0.05
TRIM28-215ENST00000601150 GAS1P54826 345 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 PDCD4Q53EL6 469 aaKnown RBP15.38■□□□□ 0.05
TRIM28-215ENST00000601150 CDC73Q6P1J9 531 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 ACAD11Q709F0 780 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 ANKRD46Q86W74 232 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 GLB1L3Q8NCI6 653 aaPredicted RBP15.38■□□□□ 0.05
TRIM28-215ENST00000601150 OR5AK3PQ8NH89 298 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 NEIL3Q8TAT5 605 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 SARAFQ96BY9 339 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 OTUB1Q96FW1 271 aaPredicted RBP15.38■□□□□ 0.05
TRIM28-215ENST00000601150 CHMP6Q96FZ7 201 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 BTBD2Q9BX70 525 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 PIGUQ9H490 435 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 SERHLQ9NQF3 203 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 SDHAF3Q9NRP4 125 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 DUSP22Q9NRW4 184 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 GPATCH2Q9NW75 528 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 GIN1Q9NXP7 522 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 MEMO1Q9Y316 297 aa15.38■□□□□ 0.05
TRIM28-215ENST00000601150 USP9YO00507 2555 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-215ENST00000601150 DOPEY1Q5JWR5 2465 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 RNF103-CHMP3A0A140T963 221 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 E9PLN8 166 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 SCO2O43819 266 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms