RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ALG11Q2TAA5 492 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 FBXO42Q6P3S6 717 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 TMEM255BQ8WV15 326 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 FAM3CQ92520 227 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 TTYH2Q9BSA4 534 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 MROQ9BYG7 248 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 TBC1D17Q9HA65 648 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 REV1Q9UBZ9 1251 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 MALT1Q9UDY8 824 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ASXL3Q9C0F0 2248 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 H0YGG7 62 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 OR10H2O60403 315 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 SLC2A10O95528 541 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 EPPINO95925 133 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 HNRNPA2B1P22626 353 aaKnown RBP10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 EIF2DP41214 584 aaKnown RBP10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ARF3P61204 181 aaPredicted RBP10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ABATP80404 500 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 COX18Q8N8Q8 333 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 MFSD9Q8NBP5 474 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 BBS10Q8TAM1 723 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ZFPM2Q8WW38 1151 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 TMEM80Q96HE8 168 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ASPNQ9BXN1 380 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 SLC38A1Q9H2H9 487 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 KIR3DX1Q9H7L2 352 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 NEK6Q9HC98 313 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 TIGARQ9NQ88 270 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 OR6C2Q9NZP2 312 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 RDH16O75452 317 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 SNX4O95219 450 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 PRG2P13727 222 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 SELENBP1Q13228 472 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 SUZ12Q15022 739 aaKnown RBP10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 DUSP5Q16690 384 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ENTPD8Q5MY95 495 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 C22orf42Q6IC83 251 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ZNF770Q6IQ21 691 aaPredicted RBP10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 ARMC6Q6NXE6 501 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 OR8J1Q8NGP2 316 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 TM9SF2Q99805 663 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 RACGAP1Q9H0H5 632 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 AKIP1Q9NQ31 210 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 HCN3Q9P1Z3 774 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 HEBP2Q9Y5Z4 205 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 SLCO1B1Q9Y6L6 691 aa10.8□□□□□ -0.68
ARHGEF1-220ENST00000600274 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 ZC3H12DA2A288 527 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 PEX12O00623 359 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 GPX5O75715 221 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 SPNP16150 400 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 GABRB1P18505 474 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 AHRP35869 848 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 PGDP52209 483 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 STEAP3Q658P3 488 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 OR4F15Q8NGB8 312 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 NECTIN4Q96NY8 510 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 SAP130Q9H0E3 1048 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 MED20Q9H944 212 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 ADAM29Q9UKF5 820 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 SLC7A7Q9UM01 511 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 RPL36Q9Y3U8 105 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 A8MVJ9 347 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 GPR89AB7ZAQ6 455 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 STK25O00506 426 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 HCRTR1O43613 425 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 CSO75390 466 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 SEMA4FO95754 770 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 LGI1O95970 557 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 GPR89BP0CG08 455 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 PSMA1P25786 263 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 AKT2P31751 481 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 TNFRSF4P43489 277 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 LIMS1P48059 325 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 HMGA2P52926 109 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 ZNF155Q12901 538 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 ZNF791Q3KP31 576 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 UBE2Q1Q7Z7E8 422 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 DTX3Q8N9I9 347 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 SMAP2Q8WU79 429 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 RSC1A1Q92681 617 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 SLC35B4Q969S0 331 aa10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 H2AFY2Q9P0M6 372 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 ASCC3Q8N3C0 2202 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-220ENST00000600274 DSCR3O14972 297 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 CDRT1O95170 752 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 CLEC2LP0C7M8 214 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 SAGP10523 405 aaPredicted RBP10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 GABRA3P34903 492 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 RAB25P57735 213 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 RPS15AP62244 130 aaKnown RBP10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 RUNX1T1Q06455 604 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 ILKQ13418 452 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 GNA13Q14344 377 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 ZIC1Q15915 447 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 OOSP2Q86WS3 158 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 MFSD4AQ8N468 514 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 NATD1Q8N6N6 113 aa10.78□□□□□ -0.68
ARHGEF1-220ENST00000600274 SYT14Q8NB59 555 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms