RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 COL8A1P27658 744 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 ZFHX3Q15911 3703 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 MMEL1Q495T6 779 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 CYP27C1Q4G0S4 372 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 RUNDC3AQ59EK9 446 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 TNFAIP8L2Q6P589 184 aaPredicted RBP17.34■□□□□ 0.37
CCDC9-205ENST00000600117 GPALPP1Q8IXQ4 340 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 TMEM156Q8N614 296 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 HORMAD2Q8N7B1 307 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 RBMXL3Q8N7X1 1067 aaKnown RBP17.34■□□□□ 0.37
CCDC9-205ENST00000600117 MDS2Q8NDY4 140 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 OR52N2Q8NGI0 321 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 PNPT1Q8TCS8 783 aaKnown RBP17.34■□□□□ 0.37
CCDC9-205ENST00000600117 GPR151Q8TDV0 419 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 ADAMTS15Q8TE58 950 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 TMBIM1Q969X1 311 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 CMTM5Q96DZ9 223 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 SPACA9Q96E40 222 aaPredicted RBP17.34■□□□□ 0.37
CCDC9-205ENST00000600117 OMA1Q96E52 524 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 CPPED1Q9BRF8 314 aaPredicted RBP17.34■□□□□ 0.37
CCDC9-205ENST00000600117 UTP23Q9BRU9 249 aaKnown RBP17.34■□□□□ 0.37
CCDC9-205ENST00000600117 IKZF5Q9H5V7 419 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 IL1RL2Q9HB29 575 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 CBLCQ9ULV8 474 aa17.34■□□□□ 0.37
CCDC9-205ENST00000600117 PDZD2O15018 2839 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 A8MVJ9 347 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 TSPAN2O60636 221 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 PPM1BO75688 479 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 NEURL1O76050 574 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 IGKV1D-16P01601 117 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 PIGAP37287 484 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 CYB561P49447 251 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 KHKP50053 298 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 NRG3P56975 720 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 RIPPLY3P57055 190 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 PSPHP78330 225 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 ARG2P78540 354 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 MRPS22P82650 360 aaKnown RBP17.33■□□□□ 0.36
CCDC9-205ENST00000600117 PLCXD2Q0VAA5 305 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 CAPRIN1Q14444 709 aaKnown RBP17.33■□□□□ 0.36
CCDC9-205ENST00000600117 KRT72Q14CN4 511 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCDC9-205ENST00000600117 IL20RBQ6UXL0 311 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 HPS6Q86YV9 775 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 BCORP1Q8N888 145 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 COX18Q8N8Q8 333 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 CATSPER1Q8NEC5 780 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 FAM110BQ8TC76 370 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 TM9SF4Q92544 642 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 CDS1Q92903 461 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 ANKRD27Q96NW4 1050 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 SIGLEC12Q96PQ1 595 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 HPF1Q9NWY4 346 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.33■□□□□ 0.36
CCDC9-205ENST00000600117 OR10H1Q9Y4A9 318 aa17.33■□□□□ 0.36
CCDC9-205ENST00000600117 HMGN4O00479 90 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 ASNA1O43681 348 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 KCNK2O95069 426 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 NPPAP01160 153 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 OR12D1P0DN82 309 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 MAGEA8P43361 318 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 TNFSF10P50591 281 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 TXNL4AP83876 142 aaKnown RBP17.32■□□□□ 0.36
CCDC9-205ENST00000600117 CBX1P83916 185 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 OC90Q02509 493 aaPredicted RBP17.32■□□□□ 0.36
CCDC9-205ENST00000600117 SELPLGQ14242 412 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 OR1C1Q15619 314 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 NTRK2Q16620 822 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 DESI1Q6ICB0 168 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 ANGPTL8Q6UXH0 198 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 DND1Q8IYX4 353 aaKnown RBP17.32■□□□□ 0.36
CCDC9-205ENST00000600117 CYP4Z2PQ8N1L4 340 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 C10orf111Q8N326 155 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 ZADH2Q8N4Q0 377 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 PCYOX1LQ8NBM8 494 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 RAB8BQ92930 207 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 HGDQ93099 445 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 LRRC58Q96CX6 371 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 RMND5BQ96G75 393 aaPredicted RBP17.32■□□□□ 0.36
CCDC9-205ENST00000600117 SLC39A3Q9BRY0 314 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 BTBD2Q9BX70 525 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 TRIM8Q9BZR9 551 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 SH2D2AQ9NP31 389 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 LRFN1Q9P244 771 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 TAGLN3Q9UI15 199 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 F8P00451 2351 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 AKAP9Q99996 3911 aa17.32■□□□□ 0.36
CCDC9-205ENST00000600117 PRAMEF27A3QJZ7 478 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 DUXAA6NLW8 204 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 AIM2O14862 343 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 DPM1O60762 260 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 REM1O75628 298 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 SOX30O94993 753 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 IL33O95760 270 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 CLDN1O95832 211 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 ETFAP13804 333 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 GPX2P18283 190 aa17.31■□□□□ 0.36
CCDC9-205ENST00000600117 PPIBP23284 216 aaKnown RBP17.31■□□□□ 0.36
CCDC9-205ENST00000600117 ELAVL4P26378 380 aaKnown RBP17.31■□□□□ 0.36
CCDC9-205ENST00000600117 TMED10P49755 219 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms