RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 SDC1P18827 310 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 DDCP20711 480 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 GPX3P22352 226 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 PRPH2P23942 346 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 FASP25445 335 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 SOX18P35713 384 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 SLC7A2P52569 658 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 NUP107P57740 925 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 KCNK10P57789 538 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 ALDH6A1Q02252 535 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 SRSF1Q07955 248 aaKnown RBP eCLIP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 MGAT2Q10469 447 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 FUT7Q11130 342 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 DUSP8Q13202 625 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 DCTN2Q13561 401 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 RPS6KA2Q15349 733 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 FAM71E1Q6IPT2 247 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 PRR22Q8IZ63 422 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 ZNF615Q8N8J6 731 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 FAM98AQ8NCA5 519 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 PSD4Q8NDX1 1056 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 OR52R1Q8NGF1 315 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 OR5M3Q8NGP4 307 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 NUBPLQ8TB37 319 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 SLC22A8Q8TCC7 542 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 MIPOL1Q8TD10 442 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 NR4A3Q92570 626 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 FRMD6Q96NE9 622 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 BBS4Q96RK4 519 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 SLX1AQ9BQ83 275 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 GPATCH1Q9BRR8 931 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 C1orf50Q9BV19 199 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 PCDHAC1Q9H158 963 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 TRIM45Q9H8W5 580 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 SLC35C2Q9NQQ7 365 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 DEPPQ9NTK1 212 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 GIMAP4Q9NUV9 329 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 ACTR3BQ9P1U1 418 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 EXO1Q9UQ84 846 aaKnown RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 OSGIN2Q9Y236 505 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 KLF13Q9Y2Y9 288 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-209ENST00000598895 CEPT1Q9Y6K0 416 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 CROCCQ5TZA2 2017 aa11.14□□□□□ -0.63
ZNF548-209ENST00000598895 TENM4Q6N022 2769 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 A0A0G2JMM0 328 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 A0A1W2PPB8 328 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 A0A1W2PRS3 328 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 DHRS12A0PJE2 317 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 C7orf72A4D263 438 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 PINLYPA6NC86 204 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 TRIM64CA6NLI5 447 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 OR6C76A6NM76 312 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 KIR3DP1A8MWS1 328 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 NPIPA5E9PKD4 350 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 SEMA7AO75326 666 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 CBX7O95931 251 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 NPPAP01160 153 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 CCL3P10147 92 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 EDN3P14138 238 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 CD1EP15812 388 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 CDH2P19022 906 aaPredicted RBP11.13□□□□□ -0.63
ZNF548-209ENST00000598895 S1PR1P21453 382 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 MYF6P23409 242 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 TDGF1P3P51864 188 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 NCBP2P52298 156 aaKnown RBP eCLIP11.13□□□□□ -0.63
ZNF548-209ENST00000598895 HPCAP84074 193 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 MAP4K2Q12851 820 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 NRF1Q16656 503 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 ZNF628Q5EBL2 1059 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 MTX3Q5HYI7 312 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 RNFT1Q5M7Z0 435 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 TBCELQ5QJ74 424 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 C6orf10Q5SRN2 563 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 ZNF324BQ6AW86 544 aaPredicted RBP11.13□□□□□ -0.63
ZNF548-209ENST00000598895 OPN5Q6U736 354 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 GFRALQ6UXV0 394 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 RTL4Q6ZR62 310 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 FKBP9P1Q75LS8 142 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 GPR141Q7Z602 305 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 AMIGO2Q86SJ2 522 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 FAM9CQ8IZT9 166 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 FAM156AQ8NDB6 213 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 ST6GALNAC3Q8NDV1 305 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 C16orf52Q8NHV5 167 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.13□□□□□ -0.63
ZNF548-209ENST00000598895 SLCO4A1Q96BD0 722 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 MAGED4Q96JG8 741 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 ITPAQ9BY32 194 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 SEC14L3Q9UDX4 400 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 NPIPA1Q9UND3 350 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 PCDHGB6Q9Y5F9 930 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 EML6Q6ZMW3 1958 aa11.13□□□□□ -0.63
ZNF548-209ENST00000598895 ASPDHA6ND91 283 aa11.12□□□□□ -0.63
ZNF548-209ENST00000598895 KLRC4-KLRK1H3BQV0 150 aa11.12□□□□□ -0.63
ZNF548-209ENST00000598895 NR5A2O00482 541 aa11.12□□□□□ -0.63
ZNF548-209ENST00000598895 AGFG2O95081 481 aa11.12□□□□□ -0.63
ZNF548-209ENST00000598895 ZNF24P17028 368 aa11.12□□□□□ -0.63
ZNF548-209ENST00000598895 EFNA1P20827 205 aaPredicted RBP11.12□□□□□ -0.63
ZNF548-209ENST00000598895 PIGAP37287 484 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms