RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	CPT1C	Q8TCG5	803 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	SFXN5	Q8TD22	340 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	VPS33A	Q96AX1	596 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	MOAP1	Q96BY2	351 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	LRRC58	Q96CX6	371 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	ASB9	Q96DX5	294 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	SGCZ	Q96LD1	299 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	TRIM4	Q9C037	500 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	MUC13	Q9H3R2	512 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	RMND5A	Q9H871	391 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	TRIM45	Q9H8W5	580 aa	Predicted RBP	18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	SACM1L	Q9NTJ5	587 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	ADA2	Q9NZK5	511 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	FAF1	Q9UNN5	650 aa	Predicted RBP	18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	AP3M1	Q9Y2T2	418 aa		18.52	■□□□□ 0.55
IRF3-221	ENST00000598808	BAHCC1	Q9P281	2608 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	DNAJA2	O60884	412 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	ANP32D	O95626	131 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	STAMBP	O95630	424 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	IFI6	P09912	130 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	ALOX5	P09917	674 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	GABRA3	P34903	492 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	CEACAM7	Q14002	265 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	INPP5J	Q15735	1006 aa	Predicted RBP	18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	ZNF791	Q3KP31	576 aa	Predicted RBP	18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	C6orf10	Q5SRN2	563 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	PRAMEF20	Q5VT98	475 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	MFSD12	Q6NUT3	480 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	ZFP1	Q6P2D0	407 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	ZNF227	Q86WZ6	799 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	CDRT4	Q8N9R6	151 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	OR4N2	Q8NGD1	307 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	DIO2	Q92813	273 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	SCMH1	Q96GD3	660 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	C16orf58	Q96GQ5	468 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	SLC35G5	Q96KT7	338 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	VPS4A	Q9UN37	437 aa		18.51	■□□□□ 0.55
IRF3-221	ENST00000598808	RFXANK	O14593	260 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	PPM1B	O75688	479 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	HMGN2	P05204	90 aa	Known RBP	18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	GSN	P06396	782 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CT45A8	P0DMV1	189 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CT45A9	P0DMV2	189 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CCL3	P10147	92 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	MEOX1	P50221	254 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	RPP38	P78345	283 aa	Known RBP	18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	TLE1	Q04724	770 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	SLC34A1	Q06495	639 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	NFYC	Q13952	458 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	TRIM25	Q14258	630 aa	Known RBP	18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	RCN1	Q15293	331 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CT45A2	Q5DJT8	189 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	LYPD8	Q6UX82	237 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	TRIML2	Q8N7C3	387 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	COX18	Q8N8Q8	333 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	GOLM1	Q8NBJ4	401 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	PIK3R3	Q92569	461 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	EFHD2	Q96C19	240 aa	Predicted RBP	18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CCDC124	Q96CT7	223 aa	Known RBP	18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	RMND5B	Q96G75	393 aa	Predicted RBP	18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CCDC115	Q96NT0	180 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	INPP5K	Q9BT40	448 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CD300A	Q9UGN4	299 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	BTNL2	Q9UIR0	455 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	CBLC	Q9ULV8	474 aa		18.5	■□□□□ 0.55
IRF3-221	ENST00000598808	HELZ2	Q9BYK8	2649 aa	Known RBP	18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	KLRC4-KLRK1	H3BQV0	150 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	PEX1	O43933	1283 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	HSD17B1	P14061	328 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	RFC3	P40938	356 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	CASP9	P55211	416 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	RPS26	P62854	115 aa	Known RBP	18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	PSG6	Q00889	435 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	PLGLB1	Q02325	96 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	LRRC74A	Q0VAA2	488 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	BNIP2	Q12982	314 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	GAB1	Q13480	694 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	FLOT2	Q14254	428 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	NTRK2	Q16620	822 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	DECR1	Q16698	335 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	SLC22A10	Q63ZE4	541 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	ZNF621	Q6ZSS3	439 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	ZNF605	Q86T29	641 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	SULF2	Q8IWU5	870 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	PSMA8	Q8TAA3	256 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	GRHL3	Q8TE85	626 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	SNRNP40	Q96DI7	357 aa	Known RBP	18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	ITCH	Q96J02	903 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	JSRP1	Q96MG2	331 aa	Predicted RBP	18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	ADO	Q96SZ5	270 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	SLC35A5	Q9BS91	424 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	LMF2	Q9BU23	707 aa	Known RBP	18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	METTL7A	Q9H8H3	244 aa		18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	MRTO4	Q9UKD2	239 aa	Known RBP	18.49	■□□□□ 0.55
IRF3-221	ENST00000598808	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		18.48	■□□□□ 0.55
IRF3-221	ENST00000598808		A0A0G2JMM0	328 aa		18.48	■□□□□ 0.55
IRF3-221	ENST00000598808		A0A1W2PPB8	328 aa		18.48	■□□□□ 0.55
IRF3-221	ENST00000598808		A0A1W2PRS3	328 aa		18.48	■□□□□ 0.55
IRF3-221	ENST00000598808	GXYLT2	A0PJZ3	443 aa		18.48	■□□□□ 0.55

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