RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ZNF317Q96PQ6 595 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 SLC35A5Q9BS91 424 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 ANGPTL4Q9BY76 406 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 TTTY12Q9BZ98 90 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 PIGUQ9H490 435 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 RABEP2Q9H5N1 569 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 IL1RL2Q9HB29 575 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 PROK2Q9HC23 129 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 DUSP22Q9NRW4 184 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 NPIPA1Q9UND3 350 aa18.03■□□□□ 0.48
SHKBP1-214ENST00000597396 MAST4O15021 2626 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 ANKUB1A6NFN9 424 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 CCDC154A6NI56 674 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 FAM166BA8MTA8 275 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 NR5A2O00482 541 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 SOX30O94993 753 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 SNX4O95219 450 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 ANP32DO95626 131 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 MATN1P21941 496 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 EXOSC6Q5RKV6 272 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 SLC30A6Q6NXT4 461 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 TMEM81Q6P7N7 255 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 ANGPTL8Q6UXH0 198 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 GFRALQ6UXV0 394 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 DNAJC14Q6Y2X3 702 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 PACS2Q86VP3 889 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 CDS1Q92903 461 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 VPS33AQ96AX1 596 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 OR7D2Q96RA2 312 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 BTBD2Q9BX70 525 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 KLHL14Q9P2G3 628 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 SEC14L3Q9UDX4 400 aa18.02■□□□□ 0.48
SHKBP1-214ENST00000597396 PTPN13Q12923 2485 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 SPENQ96T58 3664 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 GSNP06396 782 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 GNLYP22749 145 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 CDKN2CP42773 168 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 RPS26P62854 115 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 FOXO1Q12778 655 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 MRPL49Q13405 166 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 SNTA1Q13424 505 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 RCAN2Q14206 197 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 KRTCAP3Q53RY4 240 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 C6orf10Q5SRN2 563 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 METTL21CQ5VZV1 264 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 SAXO2Q658L1 398 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 FIGNL1Q6PIW4 674 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 FUNDC1Q8IVP5 155 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 SIAH3Q8IW03 269 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 SPDL1Q96EA4 605 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 GPR137Q96N19 417 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 ZFP64Q9NPA5 681 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 TMEM45AQ9NWC5 275 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 GIN1Q9NXP7 522 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 PCDHGB3Q9Y5G1 929 aa18.01■□□□□ 0.47
SHKBP1-214ENST00000597396 DUXAA6NLW8 204 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 CDC40O60508 579 aaKnown RBP eCLIP18■□□□□ 0.47
SHKBP1-214ENST00000597396 ICOSLGO75144 302 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 TRIM3O75382 744 aaPredicted RBP18■□□□□ 0.47
SHKBP1-214ENST00000597396 GLSO94925 669 aaPredicted RBP18■□□□□ 0.47
SHKBP1-214ENST00000597396 KCNK2O95069 426 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 UNC5CO95185 931 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 CBX6O95503 412 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 IGKV1D-16P01601 117 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 UQCRFS1P47985 274 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 GYS2P54840 703 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 BLOC1S3Q6QNY0 202 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 BNC2Q6ZN30 1099 aaPredicted RBP18■□□□□ 0.47
SHKBP1-214ENST00000597396 GALNT10Q86SR1 603 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 TMEM251Q8N6I4 163 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 OR5D16Q8NGK9 328 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 NEURL3Q96EH8 262 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 TMEM41AQ96HV5 264 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 OR51I1Q9H343 314 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 GALNT9Q9HCQ5 603 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 SERHLQ9NQF3 203 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 B4GALT7Q9UBV7 327 aa18■□□□□ 0.47
SHKBP1-214ENST00000597396 C2orf72A6NCS6 295 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 LRRC3CA6NJW4 275 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 GNB5O14775 395 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 ASNA1O43681 348 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 SCO2O43819 266 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 UTS2O95399 124 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 ATP6V1C1P21283 382 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 EVI2BP34910 448 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 PTGDSP41222 190 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 TRPC1P48995 793 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 MAN2A2P49641 1150 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 CLK3P49761 638 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 KHKP50053 298 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 CASP9P55211 416 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 CCNJQ5T5M9 372 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 TNFAIP8L2Q6P589 184 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 SLC2A7Q6PXP3 512 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 GHDCQ8N2G8 530 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 FAM109AQ8N4B1 249 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 OR52N2Q8NGI0 321 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 G6PC3Q9BUM1 346 aa17.99■□□□□ 0.47
SHKBP1-214ENST00000597396 NSRP1Q9H0G5 558 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms