RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 PAQR6Q6TCH4 344 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 LIPIQ6XZB0 460 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 DEF8Q6ZN54 512 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 WDR53Q7Z5U6 358 aaPredicted RBP8.06□□□□□ -1.12
SIN3B-208ENST00000596638 CDH24Q86UP0 819 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 PDZD3Q86UT5 571 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 ADGRF3Q8IZF5 1079 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 CMTM8Q8IZV2 173 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 Q8N402 240 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 FAM109AQ8N4B1 249 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 TMEM145Q8NBT3 493 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 ANKK1Q8NFD2 765 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 NLGN4YQ8NFZ3 816 aaPredicted RBP8.06□□□□□ -1.12
SIN3B-208ENST00000596638 OR52P1PQ8NH57 321 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 TEX47Q8TBZ9 253 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 RAD51AP1Q96B01 352 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 MOAP1Q96BY2 351 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 SLC35G5Q96KT7 338 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 COQ10AQ96MF6 247 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 ARHGDIGQ99819 225 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 TEX12Q9BXU0 123 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 MVB12BQ9H7P6 319 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 SLAMF7Q9NQ25 335 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 WASH6PQ9NQA3 447 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 ZNF275Q9NSD4 429 aaPredicted RBP8.06□□□□□ -1.12
SIN3B-208ENST00000596638 MAN2C1Q9NTJ4 1040 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 DLL3Q9NYJ7 618 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 SEC14L3Q9UDX4 400 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 SATB2Q9UPW6 733 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 SH2B3Q9UQQ2 575 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 CDH10Q9Y6N8 788 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 PCM1Q15154 2024 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 FANCMQ8IYD8 2048 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 COL4A2P08572 1712 aa8.06□□□□□ -1.12
SIN3B-208ENST00000596638 OTOGLQ3ZCN5 2332 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 TEX51A0A1B0GUA7 166 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 C7orf66A4D0T2 115 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CHURC1-FNTBB4DL54 471 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 INMT-MINDY4F8WBC2 141 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 PLPP1O14494 284 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CASKO14936 926 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 AKAP8O43823 692 aaKnown RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 SLC28A2O43868 658 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 B4GALT2O60909 372 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 SH3BGRLO75368 114 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 OR2B3O76000 313 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 NFATC1O95644 943 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 FGF19O95750 216 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 HMGN1P05114 100 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 EPHX1P07099 455 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 XPAP23025 273 aaPredicted RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 APEX1P27695 318 aaKnown RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 PDHA2P29803 388 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CTHP32929 405 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 FEN1P39748 380 aaKnown RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CAPZA2P47755 286 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 OR3A3P47888 321 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 MTNR1AP48039 350 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CXCL12P48061 93 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 RFX3P48380 749 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 FNTBP49356 437 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CCT3P49368 545 aaKnown RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 AP2S1P53680 142 aaPredicted RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 MAPK12P53778 367 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 ATP12AP54707 1039 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 DAB2P98082 770 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 HOXC5Q00444 222 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 REEP5Q00765 189 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CD83Q01151 205 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 MXD1Q05195 221 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 ZNF155Q12901 538 aaPredicted RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 MRPL28Q13084 256 aaKnown RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CCINQ13939 588 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 TRAM2Q15035 370 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 TRAM1Q15629 374 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 RSPO4Q2I0M5 234 aaPredicted RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 WSCD2Q2TBF2 565 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 SPDYE7PQ495Y7 208 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 ESCO2Q56NI9 601 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 FAM209AQ5JX71 171 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 TNFAIP8L2Q6P589 184 aaPredicted RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 BHLHB9Q6PI77 547 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 Q6ZVU0 165 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 ADIPOR2Q86V24 386 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 NUDT13Q86X67 352 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 KIF18BQ86Y91 864 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 RBM45Q8IUH3 476 aaKnown RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 TRIM48Q8IWZ4 208 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CFAP206Q8IYR0 622 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 KLHL36Q8N4N3 616 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 CAMKK1Q8N5S9 505 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 LILRA3Q8N6C8 439 aaPredicted RBP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 ATP6V1C2Q8NEY4 427 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 OR2L2Q8NH16 312 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 SUN3Q8TAQ9 357 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 UBASH3BQ8TF42 649 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 AKAP1Q92667 903 aaKnown RBP eCLIP8.05□□□□□ -1.12
SIN3B-208ENST00000596638 OSTF1Q92882 214 aa8.05□□□□□ -1.12
SIN3B-208ENST00000596638 FOXJ1Q92949 421 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms