RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 LRRC34Q8IZ02 419 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 ZNF781Q8N8C0 355 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
USE1-207ENST00000596136 CA5BP1Q8WTZ4 195 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 EFHD2Q96C19 240 aaPredicted RBP11.89□□□□□ -0.51
USE1-207ENST00000596136 ENKD1Q9H0I2 346 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 CENPHQ9H3R5 247 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 Q9N2J8 555 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 KCNK9Q9NPC2 374 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 ABCG2Q9UNQ0 655 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 PCNX3Q9H6A9 2034 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 FBN2P35556 2912 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 C15orf38-AP3S2A0A0A6YYH1 394 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 B4DXG7 233 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 FAM47E-STBD1D6RA91 191 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 C19orf84I3L1E1 186 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 EMC8O43402 210 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 TOXO94900 526 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 EPPINO95925 133 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 ACTL6AO96019 429 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 LAMP1P11279 417 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 BMP7P18075 431 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 PRPS1L1P21108 318 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 BGNP21810 368 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 GPC1P35052 558 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 HPCAL1P37235 193 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 PSMD4P55036 377 aaKnown RBP11.88□□□□□ -0.51
USE1-207ENST00000596136 WDR4P57081 412 aaKnown RBP11.88□□□□□ -0.51
USE1-207ENST00000596136 TFF3Q07654 80 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 STX3Q13277 289 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 WIPI1Q5MNZ9 446 aaPredicted RBP11.88□□□□□ -0.51
USE1-207ENST00000596136 RIPPLY2Q5TAB7 128 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 SEM1Q6ZVN7 128 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 CAMKMTQ7Z624 323 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 PM20D2Q8IYS1 436 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 CDRT4Q8N9R6 151 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 FNDC5Q8NAU1 212 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 NUP43Q8NFH3 380 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 OR7A2PQ8NGA2 310 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 FAM110BQ8TC76 370 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 TLCD1Q96CP7 247 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 TUBGCP3Q96CW5 907 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 WDYHV1Q96HA8 205 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 SPOCK3Q9BQ16 436 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 C1orf50Q9BV19 199 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 UGT2B28Q9BY64 529 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 C3orf14Q9HBI5 128 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 SERHLQ9NQF3 203 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 SIRT3Q9NTG7 399 aaPredicted RBP11.88□□□□□ -0.51
USE1-207ENST00000596136 MRTO4Q9UKD2 239 aaKnown RBP11.88□□□□□ -0.51
USE1-207ENST00000596136 MAPRE3Q9UPY8 281 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 EIF3LQ9Y262 564 aaKnown RBP11.88□□□□□ -0.51
USE1-207ENST00000596136 SLC6A5Q9Y345 797 aa11.88□□□□□ -0.51
USE1-207ENST00000596136 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 ZIC3O60481 467 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 G6PDP11413 515 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 PRF1P14222 555 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 CPN1P15169 458 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 IGFBP2P18065 325 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 SRD5A2P31213 254 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 CEACAM8P31997 349 aaPredicted RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 GABRA3P34903 492 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 EVI2BP34910 448 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 TIMP3P35625 211 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 ADH7P40394 386 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 ZFP36L2P47974 494 aaKnown RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 GFRA1P56159 465 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 CLDN8P56748 225 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 BST1Q10588 318 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 SF3B4Q15427 424 aaKnown RBP eCLIP11.87□□□□□ -0.51
USE1-207ENST00000596136 VPS26BQ4G0F5 336 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 CPTPQ5TA50 214 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 MFSD12Q6NUT3 480 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 WDR53Q7Z5U6 358 aaPredicted RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 YRDCQ86U90 279 aaKnown RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 CCDC71Q8IV32 467 aaPredicted RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 FADS6Q8N9I5 356 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 OR5P2Q8WZ92 322 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 ABTB1Q969K4 478 aaPredicted RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 DTNBP1Q96EV8 351 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 MS4A4EQ96PG1 132 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 PRPF18Q99633 342 aaKnown RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 BHLHE41Q9C0J9 482 aaPredicted RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 AKTIPQ9H8T0 292 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 ATAD3AQ9NVI7 634 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 FAM120CQ9NX05 1096 aaKnown RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 GIN1Q9NXP7 522 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 NOP53Q9NZM5 478 aaKnown RBP11.87□□□□□ -0.51
USE1-207ENST00000596136 Q9UFV3 132 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 FBXL2Q9UKC9 423 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 TACC2O95359 2948 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 CREBBPQ92793 2442 aa11.87□□□□□ -0.51
USE1-207ENST00000596136 IGLV3-32A0A0A0MS00 114 aa11.86□□□□□ -0.51
USE1-207ENST00000596136 GXYLT2A0PJZ3 443 aa11.86□□□□□ -0.51
USE1-207ENST00000596136 TMEM120BA0PK00 339 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms