RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PRAMEF27A3QJZ7 478 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 SAGE2PA6NJ88 616 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 OR6C76A6NM76 312 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 STMND1H3BQB6 276 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 SUV39H1O43463 412 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 KLF7O75840 302 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 PRKD3O94806 890 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 CLPSP04118 112 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 MAP3K8P41279 467 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC37A1P57057 533 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 DCAF7P61962 342 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 ELOAQ14241 798 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 SSPNQ14714 243 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 RCN1Q15293 331 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 CYBRD1Q53TN4 286 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 CRB2Q5IJ48 1285 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 RPS26P11Q5JNZ5 115 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 TBCELQ5QJ74 424 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 PRAMEF8Q5VWM4 474 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 PRAMEF7Q5VXH5 474 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 FKBP9P1Q75LS8 142 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC29A4Q7RTT9 530 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF321PQ8N8H1 164 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 SNRNP27Q8WVK2 155 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 LZICQ8WZA0 190 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 PIK3R3Q92569 461 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 TPD52L3Q96J77 140 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 RNF145Q96MT1 663 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 BTBD2Q9BX70 525 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 GPR87Q9BY21 358 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 TRIM45Q9H8W5 580 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 RNPEPL1Q9HAU8 725 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 BCL2L10Q9HD36 194 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 Q9N2J8 555 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 OR10H1Q9Y4A9 318 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 DOPEY1Q5JWR5 2465 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 CCDC88CQ9P219 2028 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 LOC102723996A0A087X1L8 192 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 GXYLT2A0PJZ3 443 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 ENO4A6NNW6 628 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 C21orf140B9A014 251 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 SEC24DO94855 1032 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 IGKV3-11P04433 115 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 UMODP07911 640 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 ANPEPP15144 967 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 DRD5P21918 477 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 TRHRP34981 398 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 DLSTP36957 453 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 PPICP45877 212 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 PCBP3P57721 371 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 SELENOWP63302 87 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 CHRNEQ04844 493 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 DNASE1L3Q13609 305 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 MAPK11Q15759 364 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 DCST2Q5T1A1 773 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 ENPP6Q6UWR7 440 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 GALNT10Q86SR1 603 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 CHDHQ8NE62 594 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 B3GNT7Q8NFL0 401 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 HOXB13Q92826 284 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 SLCO4A1Q96BD0 722 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 C8orf44Q96CB5 159 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC47A1Q96FL8 570 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 VMP1Q96GC9 406 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 VPS50Q96JG6 964 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 VSTM2LQ96N03 204 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 COL21A1Q96P44 957 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 SDF2Q99470 211 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 TREX2Q9BQ50 279 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 DOHHQ9BU89 302 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 ITPAQ9BY32 194 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 YY1AP1Q9H869 796 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 MTHFD2LQ9H903 347 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 TCFL5Q9UL49 500 aa12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 USP9YO00507 2555 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-209ENST00000595803 UTP20O75691 2785 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ABCA12Q86UK0 2595 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 STX11O75558 287 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 H6PDO95479 791 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ALPPP05187 535 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 CHRM4P08173 479 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 RAP2AP10114 183 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ETS2P15036 469 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 MMP11P24347 488 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 OTX2P32243 289 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 GPR143P51810 404 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC26A5P58743 744 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 PSG6Q00889 435 aa12.09□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC34A1Q06495 639 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms