RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PYGBP11216 843 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 KRT15P19012 456 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 TAC1P20366 129 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 DPP4P27487 766 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 BSGP35613 385 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 CDH13P55290 713 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 CLDN15P56746 228 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 BIKQ13323 160 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 TMEM249Q2WGJ8 235 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 FRG2Q64ET8 278 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 OR5M10Q6IEU7 315 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 SLC30A6Q6NXT4 461 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 LETMD1Q6P1Q0 360 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 AAGABQ6PD74 315 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 CHMP1BQ7LBR1 199 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 TDRPQ86YL5 185 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 C7orf57Q8NEG2 295 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 SMAP2Q8WU79 429 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 TMEM237Q96Q45 408 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 FRG2BQ96QU4 278 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 CXorf21Q9HAI6 301 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 KLRF1Q9NZS2 232 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 A0A0A6YYD5 115 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 A0A1W2PPM1 405 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 FAM234BA2RU67 622 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 SSX4O60224 188 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 DLX3O60479 287 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 ZIC3O60481 467 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 EEDO75530 441 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 PPM1BO75688 479 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 OTCP00480 354 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 THBS1P07996 1170 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 TSPAN8P19075 237 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 ATP5F1P24539 256 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 VSNL1P62760 191 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF678Q5SXM1 525 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 FAM219BQ5XKK7 198 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 TTC19Q6DKK2 380 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 MRM1Q6IN84 353 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 STAC2Q6ZMT1 411 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 MILR1Q7Z6M3 343 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 NUDT13Q86X67 352 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 FNDC9Q8TBE3 224 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 EPS8L3Q8TE67 593 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 SHARPINQ9H0F6 387 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 OR10A5Q9H207 317 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 DDX31Q9H8H2 851 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 PPCSQ9HAB8 311 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 MS4A12Q9NXJ0 267 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 PHF11Q9UIL8 331 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF225Q9UK10 706 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 EMCNQ9ULC0 261 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 PROCRQ9UNN8 238 aa12.34□□□□□ -0.43
SHKBP1-208ENST00000595726 A0A1W2PR48 441 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 SMIM23A6NLE4 172 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 C17orf51A8MQB3 221 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 B4DXG7 233 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 CLOCKO15516 846 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 TMPRSS11DO60235 418 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 CDH16O75309 829 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 UGT2B11O75310 529 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 GLRA3O75311 464 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 SUPT7LO94864 414 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 SEMA3DO95025 777 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 AIFM1O95831 613 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 SLC35E2P0CK97 266 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 PTNP21246 168 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 TLX1P31314 330 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 THBS2P35442 1172 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 HSD17B3P37058 310 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 SUCLG1P53597 346 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 B3GALT5-AS1P59052 145 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 CLCQ05315 142 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 IFT88Q13099 833 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 RASA2Q15283 850 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 UNC50Q53HI1 259 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 NUP54Q7Z3B4 507 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 PLCZ1Q86YW0 608 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 TRPC4APQ8TEL6 797 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 OMA1Q96E52 524 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 HS6ST2Q96MM7 605 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 TNFRSF13CQ96RJ3 184 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 SERPINI1Q99574 410 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 PELOQ9BRX2 385 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 RHNO1Q9BSD3 238 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 PINK1Q9BXM7 581 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 ELOVL6Q9H5J4 265 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 RNF122Q9H9V4 155 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 FARSBQ9NSD9 589 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 LYARQ9NX58 379 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 DCDC2Q9UHG0 476 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 ASB4Q9Y574 426 aa12.33□□□□□ -0.44
SHKBP1-208ENST00000595726 PRAMEF25A6NGN4 478 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 PGRMC2O15173 223 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 OR4F21O95013 312 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 GBAP04062 536 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 FAM58BPP0C7Q3 252 aa12.32□□□□□ -0.44
SHKBP1-208ENST00000595726 SRD5A1P18405 259 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms