RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 POM121L1PQ3SYA9 428 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ZNF311Q5JNZ3 666 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ZNF620Q6ZNG0 422 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SZRD1Q7Z422 152 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 TPRA1Q86W33 373 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 CCDC28AQ8IWP9 274 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 OR4F15Q8NGB8 312 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 RFT1Q96AA3 541 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ARRDC3Q96B67 414 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 OTUB1Q96FW1 271 aaPredicted RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 FAM46AQ96IP4 442 aaKnown RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SECISBP2Q96T21 854 aaKnown RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 FN3KQ9H479 309 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 GALNT9Q9HCQ5 603 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 KLHL28Q9NXS3 571 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 TNFRSF10DQ9UBN6 386 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 HSPB11Q9Y547 144 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 H7BY64 318 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 SLC9A3R1O14745 358 aaPredicted RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 SHOXO15266 292 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 EMC8O43402 210 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 OR1F1O43749 312 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 PLOD3O60568 738 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 MOSPD3O75425 235 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 NCR1O76036 304 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 DHFRP00374 187 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 GNRH1P01148 92 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 HMGN2P05204 90 aaKnown RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 ADH1AP07327 375 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 GNSP15586 552 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 F8A1P23610 371 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 AGFG1P52594 562 aaKnown RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 AP2S1P53680 142 aaPredicted RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 CTBP2P56545 445 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 CSNK1G2P78368 415 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 PRR5P85299 388 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 LASP1Q14847 261 aaKnown RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 CEP78Q5JTW2 689 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 KIAA1161Q6NSJ0 714 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 SMARCD3Q6STE5 483 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 LYPD8Q6UX82 237 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 ADAMTSL4Q6UY14 1074 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 MBOAT2Q6ZWT7 520 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 ERN2Q76MJ5 926 aaKnown RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 OAFQ86UD1 273 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 RAB42Q8N4Z0 105 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 C2orf73Q8N5S3 287 aaPredicted RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 AMER3Q8N944 861 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 SLAIN1Q8ND83 568 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 OR5H6Q8NGV6 325 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 SCMH1Q96GD3 660 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 PRAP1Q96NZ9 151 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 WACQ9BTA9 647 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 SLC38A1Q9H2H9 487 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 RANBP3Q9H6Z4 567 aaPredicted RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 KRCC1Q9NPI7 259 aaPredicted RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 INPP5EQ9NRR6 644 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 NLGN3Q9NZ94 848 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 CNIH4Q9P003 139 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 H2AFY2Q9P0M6 372 aaPredicted RBP12.4□□□□□ -0.42
VRK3-209ENST00000594948 ING4Q9UNL4 249 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 NCKAP1Q9Y2A7 1128 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 NOTCH4Q99466 2003 aa12.4□□□□□ -0.42
VRK3-209ENST00000594948 FEZF1A0PJY2 475 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 GSAPA4D1B5 854 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 LINC00862A6NCI5 91 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 LRIT2A6NDA9 550 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CD8B2A6NJW9 211 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 C12orf71A8MTZ7 269 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 AKR7A2O43488 359 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CHP2O43745 196 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CD8BP10966 210 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 NPR2P20594 1047 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 EVI2BP34910 448 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CAPZA2P47755 286 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 FZD5Q13467 585 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 SLC9A5Q14940 896 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 TEAD2Q15562 447 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ZNF791Q3KP31 576 aaPredicted RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 METRNLQ641Q3 311 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 MRM1Q6IN84 353 aaKnown RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 PYHIN1Q6K0P9 492 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CDC73Q6P1J9 531 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ABI3BPQ7Z7G0 1075 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 LRRTM4Q86VH4 590 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 KLBQ86Z14 1044 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 OR2T33Q8NG76 320 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 OR7D2Q96RA2 312 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 HDHD2Q9H0R4 259 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 OSGEPL1Q9H4B0 414 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ATP13A2Q9NQ11 1180 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 BABAM2Q9NXR7 383 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 PTGFRNQ9P2B2 879 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ENTPD4Q9Y227 616 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 AUP1Q9Y679 476 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CPSF4LA6NMK7 179 aaKnown RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 CCL16O15467 120 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms