RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CASKO14936 926 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 SMNDC1O75940 238 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRIM47-207ENST00000593089 GSTM5P46439 218 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 STX5Q13190 355 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 IMPG1Q17R60 797 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 WFDC11Q8NEX6 87 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 OR2M3Q8NG83 312 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 SHCBP1LQ9BZQ2 653 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 DLL4Q9NR61 685 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 SIRT5Q9NXA8 310 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 FLRT3Q9NZU0 649 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 MED11Q9P086 117 aa18.51■□□□□ 0.55
TRIM47-207ENST00000593089 POLR3HQ9Y535 204 aaPredicted RBP18.51■□□□□ 0.55
TRIM47-207ENST00000593089 MAP1AP78559 2803 aaPredicted RBP18.51■□□□□ 0.55
TRIM47-207ENST00000593089 A0A1W2PPR1 153 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 SERTM1A2A2V5 107 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 SLC22A20A6NK97 555 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 GSTA1P08263 222 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 PEPDP12955 493 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 HK1P19367 917 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 EEF1A1P68104 462 aaKnown RBP18.5■□□□□ 0.55
TRIM47-207ENST00000593089 BCL2A1Q16548 175 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 EEF1A1P5Q5VTE0 462 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 RAET1LQ5VY80 246 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 CNEP1R1Q8N9A8 125 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 FADS6Q8N9I5 356 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 ACMSDQ8TDX5 336 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 PSMC3IPQ9P2W1 217 aaPredicted RBP18.5■□□□□ 0.55
TRIM47-207ENST00000593089 NDRG3Q9UGV2 375 aa18.5■□□□□ 0.55
TRIM47-207ENST00000593089 A0A087WV62 115 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 FADS1O60427 444 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 HOXB4P17483 251 aaPredicted RBP18.49■□□□□ 0.55
TRIM47-207ENST00000593089 NTSP30990 170 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 RFX3P48380 749 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 FAM27E3Q08E93 113 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 SLC29A2Q14542 456 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 DECR1Q16698 335 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 CYP27C1Q4G0S4 372 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 FAM71E1Q6IPT2 247 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 VWA1Q6PCB0 445 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 IFT20Q8IY31 132 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 MEIOBQ8N635 442 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 OR5M1Q8NGP8 315 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 FIG4Q92562 907 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 RTN4RQ9BZR6 473 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 GLIPR2Q9H4G4 154 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 MYNNQ9NPC7 610 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 SDHAF3Q9NRP4 125 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 DDX18Q9NVP1 670 aaKnown RBP18.49■□□□□ 0.55
TRIM47-207ENST00000593089 DCDC2Q9UHG0 476 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 EMCNQ9ULC0 261 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 GRID1Q9ULK0 1009 aa18.49■□□□□ 0.55
TRIM47-207ENST00000593089 C19orf53Q9UNZ5 99 aaPredicted RBP18.49■□□□□ 0.55
TRIM47-207ENST00000593089 EIF3LQ9Y262 564 aaKnown RBP18.49■□□□□ 0.55
TRIM47-207ENST00000593089 G3V2L1 256 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 H0YC42 278 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 UPK1AO00322 258 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 MSTNO14793 375 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 SEC14L5O43304 696 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 CRCPO75575 148 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 FAM153BP0C7A2 387 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 MYL2P10916 166 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 FOSL1P15407 271 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 CD53P19397 219 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 SUCLG1P53597 346 aaKnown RBP18.48■□□□□ 0.55
TRIM47-207ENST00000593089 TPD52P55327 224 aaPredicted RBP18.48■□□□□ 0.55
TRIM47-207ENST00000593089 SIRPAP78324 504 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 FAM153CQ494X1 144 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 OR2A2Q6IF42 318 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 ZYG11AQ6WRX3 759 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRIM47-207ENST00000593089 MZB1Q8WU39 189 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 SMPDL3BQ92485 455 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 STARD4Q96DR4 205 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 CCDC126Q96EE4 140 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 FAM111AQ96PZ2 611 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 NEUROD4Q9HD90 331 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 Q9N2J8 555 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 ABCG2Q9UNQ0 655 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 ZNF337Q9Y3M9 751 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 TESMINQ9Y4I5 508 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 PCNX3Q9H6A9 2034 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 VPS13CQ709C8 3753 aa18.48■□□□□ 0.55
TRIM47-207ENST00000593089 A0A1W2PPM1 405 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 H3BML4 177 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 SLITRK5O94991 958 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 CRHP06850 196 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 CLK3P49761 638 aaKnown RBP18.47■□□□□ 0.55
TRIM47-207ENST00000593089 CLDN15P56746 228 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 ZNHIT3Q15649 155 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-207ENST00000593089 MARCH3Q86UD3 253 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 OR2L13Q8N349 312 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 DUSP19Q8WTR2 217 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 ELP4Q96EB1 424 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 PGM2Q96G03 612 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 AMDHD1Q96NU7 426 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 PINK1Q9BXM7 581 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 OPN3Q9H1Y3 402 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-207ENST00000593089 PTGES2Q9H7Z7 377 aa18.47■□□□□ 0.55
TRIM47-207ENST00000593089 TAS2R7Q9NYW3 318 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms