RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 EFR3AQ14156 821 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 RNFT1Q5M7Z0 435 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 COX20Q5RI15 118 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 LRIF1Q5T3J3 769 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 CCNJQ5T5M9 372 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 PRAMEF20Q5VT98 475 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 FIGNL1Q6PIW4 674 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 DLEU7Q6UYE1 221 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 ZAR1Q86SH2 424 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 GALNT10Q86SR1 603 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 MTDHQ86UE4 582 aaKnown RBP9.12□□□□□ -0.95
TPM4-216ENST00000592822 RETREG3Q86VR2 466 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 RNF130Q86XS8 419 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 MSRB3Q8IXL7 192 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 TRIML2Q8N7C3 387 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 ZFP62Q8NB50 900 aaPredicted RBP9.12□□□□□ -0.95
TPM4-216ENST00000592822 OR2M7Q8NG81 312 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 PNPT1Q8TCS8 783 aaKnown RBP9.12□□□□□ -0.95
TPM4-216ENST00000592822 GRHL3Q8TE85 626 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 ZFP90Q8TF47 636 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 TSPEARQ8WU66 669 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 RNF138Q8WVD3 245 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 AURKBQ96GD4 344 aaPredicted RBP9.12□□□□□ -0.95
TPM4-216ENST00000592822 CCT8L2Q96SF2 557 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 BARD1Q99728 777 aaKnown RBP9.12□□□□□ -0.95
TPM4-216ENST00000592822 FAM173AQ9BQD7 235 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 ANGPTL4Q9BY76 406 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 OR51I1Q9H343 314 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 MRGBPQ9NV56 204 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 TUBA8Q9NY65 449 aaPredicted RBP9.12□□□□□ -0.95
TPM4-216ENST00000592822 NDUFAF1Q9Y375 327 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 PCDHB14Q9Y5E9 798 aa9.12□□□□□ -0.95
TPM4-216ENST00000592822 TRBV5-3A0A0A0MS03 114 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 PRAMEF27A3QJZ7 478 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 PRAMEF25A6NGN4 478 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 DUXAA6NLW8 204 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 FBP2O00757 339 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 ADAM10O14672 748 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 ANGPT2O15123 496 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 SLC22A2O15244 555 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 SLC28A2O43868 658 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 FADS1O60427 444 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 CCDC22O60826 627 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 ICOSLGO75144 302 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 WISP2O76076 250 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 SOX30O94993 753 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 OR12D1P0DN82 309 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 MST1P26927 711 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 RFC3P40938 356 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 PTGDSP41222 190 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 KCNJ2P63252 427 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 RPP38P78345 283 aaKnown RBP9.11□□□□□ -0.95
TPM4-216ENST00000592822 TLE1Q04724 770 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.11□□□□□ -0.95
TPM4-216ENST00000592822 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 DCST2Q5T1A1 773 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 ZNF324BQ6AW86 544 aaPredicted RBP9.11□□□□□ -0.95
TPM4-216ENST00000592822 HEPHL1Q6MZM0 1159 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 TNFAIP8L2Q6P589 184 aaPredicted RBP9.11□□□□□ -0.95
TPM4-216ENST00000592822 TMEM81Q6P7N7 255 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 FAM180AQ6UWF9 173 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 SNX32Q86XE0 403 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 DPP10Q8N608 796 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 DNAJB8Q8NHS0 232 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 CPT1CQ8TCG5 803 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 RAB8BQ92930 207 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 TMCO6Q96DC7 493 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 SDF2Q99470 211 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 CCDC106Q9BWC9 280 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 MYLK2Q9H1R3 596 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 METTL7AQ9H8H3 244 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 TPT1P8Q9HAU6 139 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 VAPAQ9P0L0 249 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 LEF1Q9UJU2 399 aaPredicted RBP9.11□□□□□ -0.95
TPM4-216ENST00000592822 MRTO4Q9UKD2 239 aaKnown RBP9.11□□□□□ -0.95
TPM4-216ENST00000592822 CAPN7Q9Y6W3 813 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.11□□□□□ -0.95
TPM4-216ENST00000592822 NCKAP5O14513 1909 aa9.11□□□□□ -0.95
TPM4-216ENST00000592822 LOC100653049A0A140TA62 436 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 C2orf72A6NCS6 295 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 LRRC3CA6NJW4 275 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 CLIC1O00299 241 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 HMGN4O00479 90 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 ASNA1O43681 348 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 HS6ST1O60243 411 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 TRIM3O75382 744 aaPredicted RBP9.1□□□□□ -0.95
TPM4-216ENST00000592822 KRT34O76011 436 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 GLSO94925 669 aaPredicted RBP9.1□□□□□ -0.95
TPM4-216ENST00000592822 UNC5CO95185 931 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 SNX4O95219 450 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 UTS2O95399 124 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 KRT75O95678 551 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 FAM107AO95990 144 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 CRYABP02511 175 aaKnown RBP9.1□□□□□ -0.95
TPM4-216ENST00000592822 KHKP50053 298 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 GAS1P54826 345 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 PSMD4P55036 377 aaKnown RBP9.1□□□□□ -0.95
TPM4-216ENST00000592822 FUT5Q11128 374 aa9.1□□□□□ -0.95
TPM4-216ENST00000592822 SNTA1Q13424 505 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms