RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TRIM2Q9C040 744 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 SLC35C2Q9NQQ7 365 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 VNN3Q9NY84 501 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 MLXQ9UH92 298 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 ATPIF1Q9UII2 106 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 CAMK2AQ9UQM7 478 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 MEMO1Q9Y316 297 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 WDR45Q9Y484 360 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 CCL27Q9Y4X3 112 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 SNX11Q9Y5W9 270 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 TMEM14AQ9Y6G1 99 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 ANKRD12Q6UB98 2062 aa3.34□□□□□ -1.88
VMP1-216ENST00000592790 A6NJY4 79 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 J3QLW9 94 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SAP18O00422 153 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 EIF1AYO14602 144 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 OR10H2O60403 315 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TPST2O60704 377 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RBBP9O75884 186 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SCGNO76038 276 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 IGHA2P01877 340 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CSF1P09603 554 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CSF3P09919 207 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF19P17023 458 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 FPR3P25089 353 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GRK6P43250 576 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 EIF1AXP47813 144 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZFP36L2P47974 494 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 EVX1P49640 407 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GZMMP51124 257 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 DLX5P56178 289 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ACTBP60709 375 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ACTG1P63261 375 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 FAM189BP81408 668 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SLC7A9P82251 487 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 BIKQ13323 160 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TNK1Q13470 666 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 DYRK1AQ13627 763 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MRPL58Q14197 206 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 SF1Q15637 639 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ALG11Q2TAA5 492 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 YIF1BQ5BJH7 314 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ARSIQ5FYB1 569 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 UBE2NLQ5JXB2 153 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SLC6A19Q695T7 634 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PGBD2Q6P3X8 592 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PODNL1Q6PEZ8 512 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 KIAA1324Q6UXG2 1013 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 C3P1Q6ZMU1 363 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 Q6ZVL8 140 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PGAP1Q75T13 922 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SPATC1Q76KD6 591 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ABHD13Q7L211 337 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MEPCEQ7L2J0 689 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 WDR53Q7Z5U6 358 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 KCTD20Q7Z5Y7 419 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 BTLAQ7Z6A9 289 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PDZD3Q86UT5 571 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PAQR7Q86WK9 346 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF440Q8IYI8 595 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 FTMTQ8N4E7 242 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF433Q8N7K0 673 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 OR4C15Q8NGM1 316 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 OR52P1PQ8NH57 321 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 OR5W2Q8NH69 310 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SORCS1Q8WY21 1168 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CNN2Q99439 309 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 GPR62Q9BZJ7 368 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SLC6A16Q9GZN6 736 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 OR51V1Q9H2C8 321 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MVB12BQ9H7P6 319 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MEPEQ9NQ76 525 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF275Q9NSD4 429 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ACOXLQ9NUZ1 547 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 NUDT15Q9NV35 164 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TMEM30AQ9NV96 361 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 FTSJ1Q9UET6 329 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TAC3Q9UHF0 121 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CYB5R1Q9UHQ9 305 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 KIF25Q9UIL4 384 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CBLCQ9ULV8 474 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CPSF4LA6NMK7 179 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 GNB5O14775 395 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 DSCR3O14972 297 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RNF13O43567 381 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 C1orf105O95561 183 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RENP00797 406 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CYBAP13498 195 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PRKCAP17252 672 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 HTR2AP28223 471 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 HOXC8P31273 242 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PRKAR1BP31321 381 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ETV3P41162 512 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CENPAP49450 140 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GPR143P51810 404 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 AFF1P51825 1210 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 NRG3P56975 720 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TIAL1Q01085 375 aaKnown RBP eCLIP3.33□□□□□ -1.884e-22■■■■■ 37
VMP1-216ENST00000592790 SLC3A1Q07837 685 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms