RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ETV5P41161 510 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 ETV1P50549 477 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 TPMTP51580 245 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 HOXC5Q00444 222 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 MLLT1Q03111 559 aaPredicted RBP15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 DLX2Q07687 328 aaPredicted RBP15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 MAP4K2Q12851 820 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 ILF3Q12906 894 aaKnown RBP eCLIP15.49■□□□□ 0.079e-9■■□□□ 12
PRKCSH-217ENST00000592741 MINDY4Q4G0A6 757 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 EIPR1Q53HC9 387 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 C11orf74Q86VG3 221 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 PHC2Q8IXK0 858 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 POC5Q8NA72 575 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 PIK3R3Q92569 461 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 OSTF1Q92882 214 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 ITPKCQ96DU7 683 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 KLHL25Q9H0H3 589 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 SIAEQ9HAT2 523 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 SMURF1Q9HCE7 757 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 CPNE5Q9HCH3 593 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 LYRM4Q9HD34 91 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 FGF20Q9NP95 211 aaPredicted RBP15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 PILRAQ9UKJ1 303 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 SPACA6W5XKT8 324 aa15.49■□□□□ 0.07
PRKCSH-217ENST00000592741 GOLGA4Q13439 2230 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 ZNF670-ZNF695F2Z2N8 137 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 ALOX12P18054 663 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 SEPHS1P49903 392 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 DUSP5Q16690 384 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 LIPKQ5VXJ0 399 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 ZNF836Q6ZNA1 936 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 GDF7Q7Z4P5 450 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 CCDC190Q86UF4 302 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 NKAIN4Q8IVV8 208 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 CADM3Q8N126 398 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 FAM83FQ8NEG4 500 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 TOR1AIP2Q8NFQ8 470 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 ZFPM2Q8WW38 1151 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 QPCTLQ9NXS2 382 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 NTNG1Q9Y2I2 539 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 PCDHGB6Q9Y5F9 930 aa15.48■□□□□ 0.07
PRKCSH-217ENST00000592741 LOC105369274A0A096LPK9 316 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 LOC102723532A0A0G2JNH3 316 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 C2orf74A8MZ97 194 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 KDM4EB2RXH2 506 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 ZSCAN9O15535 394 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 NTN1O95631 604 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 CPEP16870 476 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 GTF2E2P29084 291 aaKnown RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 RORCP51449 518 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 GAS1P54826 345 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 WNT4P56705 351 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 SLC13A2Q13183 592 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 ZNF628Q5EBL2 1059 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 TMEM31Q5JXX7 168 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 EOGTQ5NDL2 527 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 CLEC12AQ5QGZ9 265 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 MBOAT2Q6ZWT7 520 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 OR4N4Q8N0Y3 316 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 ZNF655Q8N720 491 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 ANKK1Q8NFD2 765 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 RPLP0P6Q8NHW5 317 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 RSC1A1Q92681 617 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 MCOLN1Q9GZU1 580 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 KRCC1Q9NPI7 259 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 GPR52Q9Y2T5 361 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 EXOSC1Q9Y3B2 195 aaKnown RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 ENTPD2Q9Y5L3 495 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 TCRBV21S2A2A0A5A6 115 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 TMEM129A0AVI4 362 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 ZNF860A6NHJ4 632 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 H0YGG7 62 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 WWP2O00308 870 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 DNAJB6O75190 326 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 TNFP01375 233 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 EIF2S1P05198 315 aaKnown RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 THBS1P07996 1170 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 TSPAN19P0C672 248 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 GNSP15586 552 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 RPS19P39019 145 aaKnown RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 MTNR1AP48039 350 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 ARF3P61204 181 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 TMEM44Q2T9K0 475 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 TMEM92Q6UXU6 159 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 Q6ZSR6 202 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 NRMQ8IXM6 262 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 RNF217Q8TC41 542 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 POT1Q9NUX5 634 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 C19orf53Q9UNZ5 99 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 CARD8Q9Y2G2 431 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 FANCMQ8IYD8 2048 aa15.47■□□□□ 0.07
PRKCSH-217ENST00000592741 CTDSP2O14595 271 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 SNX4O95219 450 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 PTTG1O95997 202 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 GPR4P46093 362 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 ID2Q02363 134 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 DUSP8Q13202 625 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 KRR1Q13601 381 aaKnown RBP15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 RANBP3LQ86VV4 465 aaPredicted RBP15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 SIMC1Q8NDZ2 872 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms