RNA–Protein interactions for RNA: ENST00000591762.1

SPHK1-209, Transcript of sphingosine kinase 1, humanhuman

TSL 2

Gene SPHK1, Length 2,502 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-209ENST00000591762 C8orf89P0DMQ9 161 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 KIR2DL3P43628 341 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 GINS1Q14691 196 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 ZIC1Q15915 447 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 SLC35F1Q5T1Q4 408 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 PODNL1Q6PEZ8 512 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 SHFQ7M4L6 423 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 ABI3BPQ7Z7G0 1075 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 ZFP41Q8N8Y5 198 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 OR5D16Q8NGK9 328 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 ENKURQ8TC29 256 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 ZBED6CLQ96FA7 236 aaPredicted RBP16.6■□□□□ 0.25
SPHK1-209ENST00000591762 ZNF354BQ96LW1 612 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 FRMD6Q96NE9 622 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 GLIPR2Q9H4G4 154 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 DIMT1Q9UNQ2 313 aaKnown RBP16.6■□□□□ 0.25
SPHK1-209ENST00000591762 GPR52Q9Y2T5 361 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 MAU2Q9Y6X3 613 aa16.6■□□□□ 0.25
SPHK1-209ENST00000591762 A0A1W2PS29 197 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 GABRG2P18507 467 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 HNRNPA2B1P22626 353 aaKnown RBP16.59■□□□□ 0.25
SPHK1-209ENST00000591762 IGFBP4P22692 258 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 CERS1P27544 350 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 CMPK1P30085 196 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 CCT3P49368 545 aaKnown RBP16.59■□□□□ 0.25
SPHK1-209ENST00000591762 PRKAG1P54619 331 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 KIAA1024LP59773 190 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 CHRNEQ04844 493 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 SLC9A5Q14940 896 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 SYPL1Q16563 259 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 ACSM5Q6NUN0 579 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 LAPTM4BQ86VI4 370 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 ACOT4Q8N9L9 421 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 TTLQ8NG68 377 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 TM9SF4Q92544 642 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 KCTD7Q96MP8 289 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 TREX2Q9BQ50 279 aaPredicted RBP16.59■□□□□ 0.25
SPHK1-209ENST00000591762 KIR3DX1Q9H7L2 352 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 RNF121Q9H920 327 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 PRDM7Q9NQW5 492 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 COMMD3Q9UBI1 195 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 NDRG2Q9UN36 371 aaKnown RBP16.59■□□□□ 0.25
SPHK1-209ENST00000591762 A0A1W2PR48 441 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 MYL12AP19105 171 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 MMP11P24347 488 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 KCNJ5P48544 419 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 SNRPNP63162 240 aaKnown RBP16.59■□□□□ 0.25
SPHK1-209ENST00000591762 OCLNQ16625 522 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 CRTC2Q53ET0 693 aaPredicted RBP16.59■□□□□ 0.25
SPHK1-209ENST00000591762 ZNF542PQ5EBM4 170 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 C18orf63Q68DL7 685 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 ABHD17CQ6PCB6 329 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 PRR23CQ6ZRP0 262 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 IQCHQ86VS3 1027 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 RDH10Q8IZV5 341 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 FAM181AQ8N9Y4 354 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 SIMC1Q8NDZ2 872 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 OR52P1PQ8NH57 321 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 ZNF582Q96NG8 517 aaPredicted RBP16.59■□□□□ 0.25
SPHK1-209ENST00000591762 GPA33Q99795 319 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 KATNB1Q9BVA0 655 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 ADAM29Q9UKF5 820 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 HEBP2Q9Y5Z4 205 aa16.59■□□□□ 0.25
SPHK1-209ENST00000591762 LOC105371267A0A1B0GV96 52 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 PLA2G10O15496 165 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 ALX3O95076 343 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 YES1P07947 543 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 OR12D1P0DN82 309 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 CPEP16870 476 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 HIST1H1TP22492 207 aaPredicted RBP16.58■□□□□ 0.25
SPHK1-209ENST00000591762 APEX1P27695 318 aaKnown RBP16.58■□□□□ 0.25
SPHK1-209ENST00000591762 SLC9A3P48764 834 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 NCBP2P52298 156 aaKnown RBP eCLIP16.58■□□□□ 0.251e-14■□□□□ 8.7
SPHK1-209ENST00000591762 ABATP80404 500 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 SNAPC1Q16533 368 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 ZER1Q7Z7L7 766 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 BPHLQ86WA6 291 aaPredicted RBP16.58■□□□□ 0.25
SPHK1-209ENST00000591762 SFTPA2Q8IWL1 248 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 CLDN22Q8N7P3 220 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 KCT2Q8NC54 265 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 OR4K5Q8NGD3 323 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 PATE1Q8WXA2 126 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 NECTIN4Q96NY8 510 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 SRMSQ9H3Y6 488 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 SERHL2Q9H4I8 314 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 NEUROD4Q9HD90 331 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 APOBEC3BQ9UH17 382 aaKnown RBP16.58■□□□□ 0.25
SPHK1-209ENST00000591762 A4GNTQ9UNA3 340 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 PRELID1Q9Y255 219 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 MTCH2Q9Y6C9 303 aa16.58■□□□□ 0.25
SPHK1-209ENST00000591762 OR6C70A6NIJ9 312 aa16.58■□□□□ 0.24
SPHK1-209ENST00000591762 POLR1CO15160 346 aaPredicted RBP16.58■□□□□ 0.24
SPHK1-209ENST00000591762 TRAPPC2P0DI81 140 aa16.58■□□□□ 0.24
SPHK1-209ENST00000591762 TRAPPC2BP0DI82 140 aa16.58■□□□□ 0.24
SPHK1-209ENST00000591762 QPRTQ15274 297 aa16.58■□□□□ 0.24
SPHK1-209ENST00000591762 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.58■□□□□ 0.24
SPHK1-209ENST00000591762 TJAP1Q5JTD0 557 aa16.58■□□□□ 0.24
SPHK1-209ENST00000591762 SIGIRRQ6IA17 410 aa16.58■□□□□ 0.24
SPHK1-209ENST00000591762 TYW3Q6IPR3 259 aaKnown RBP16.58■□□□□ 0.24
SPHK1-209ENST00000591762 Q6ZSR6 202 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms