RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 RNF111Q6ZNA4 994 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 DND1Q8IYX4 353 aaKnown RBP16.47■□□□□ 0.23
VAT1-208ENST00000590924 ZNF615Q8N8J6 731 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 ADCY4Q8NFM4 1077 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 OR9A2Q8NGT5 310 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 PAQR8Q8TEZ7 354 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 SPACA9Q96E40 222 aaPredicted RBP16.47■□□□□ 0.23
VAT1-208ENST00000590924 ELP4Q96EB1 424 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 UCK2Q9BZX2 261 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 OR10A5Q9H207 317 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 FAM120CQ9NX05 1096 aaKnown RBP16.47■□□□□ 0.23
VAT1-208ENST00000590924 NTMQ9P121 344 aa16.47■□□□□ 0.23
VAT1-208ENST00000590924 HIVEP1P15822 2718 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 FAM234BA2RU67 622 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 HRKO00198 91 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 SCN2BO60939 215 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 NCF2P19878 526 aaPredicted RBP16.46■□□□□ 0.23
VAT1-208ENST00000590924 WNT3P56703 355 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 SLC10A1Q14973 349 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 LTB4RQ15722 352 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 FAM174BQ3ZCQ3 159 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 TRMT12Q53H54 448 aaKnown RBP16.46■□□□□ 0.23
VAT1-208ENST00000590924 MSANTD1Q6ZTZ1 278 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 SLC29A4Q7RTT9 530 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 ZNF551Q7Z340 670 aaPredicted RBP16.46■□□□□ 0.23
VAT1-208ENST00000590924 SPATA21Q7Z572 469 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 CDH24Q86UP0 819 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 CCDC71Q8IV32 467 aaPredicted RBP16.46■□□□□ 0.23
VAT1-208ENST00000590924 OR5M9Q8NGP3 310 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 C10orf82Q8WW14 230 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 MARK4Q96L34 752 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 ELAC2Q9BQ52 826 aaKnown RBP16.46■□□□□ 0.23
VAT1-208ENST00000590924 TTYH2Q9BSA4 534 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 ZNF385DQ9H6B1 395 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 PRODH2Q9UF12 536 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 PCDHGB4Q9UN71 923 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 C19orf53Q9UNZ5 99 aaPredicted RBP16.46■□□□□ 0.23
VAT1-208ENST00000590924 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.46■□□□□ 0.23
VAT1-208ENST00000590924 DOCK7Q96N67 2140 aa16.46■□□□□ 0.23
VAT1-208ENST00000590924 SNX3O60493 162 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 HCN1O60741 890 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 SHOX2O60902 331 aaPredicted RBP16.45■□□□□ 0.22
VAT1-208ENST00000590924 WDR1O75083 606 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 CBX7O95931 251 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 CLPSP04118 112 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 PGRP06401 933 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 CELA3AP09093 270 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 ADSLP30566 484 aaPredicted RBP16.45■□□□□ 0.22
VAT1-208ENST00000590924 SSTR4P31391 388 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 GPC1P35052 558 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 PIGAP37287 484 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 MAN2A2P49641 1150 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 POLR2JP52435 117 aaKnown RBP16.45■□□□□ 0.22
VAT1-208ENST00000590924 NME5P56597 212 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 SPANXN4Q5MJ08 99 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 OR4F3Q6IEY1 312 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 ZNF585AQ6P3V2 769 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 B3GNT6Q6ZMB0 384 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 DMRTC2Q8IXT2 367 aaPredicted RBP16.45■□□□□ 0.22
VAT1-208ENST00000590924 OR2L13Q8N349 312 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 FBXW8Q8N3Y1 598 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 C17orf47Q8NEP4 570 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 TSPEARQ8WU66 669 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 NUDT8Q8WV74 236 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 KAT2AQ92830 837 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 TP53INP1Q96A56 240 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 SARAFQ96BY9 339 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 ZNF703Q9H7S9 590 aaPredicted RBP16.45■□□□□ 0.22
VAT1-208ENST00000590924 C3orf14Q9HBI5 128 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 NEUROD4Q9HD90 331 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 TAS2R9Q9NYW1 312 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 BTNL2Q9UIR0 455 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 ITGB1BP2Q9UKP3 347 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 BOKQ9UMX3 212 aaPredicted RBP16.45■□□□□ 0.22
VAT1-208ENST00000590924 FAM215AQ9Y5M1 114 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 MPDZO75970 2070 aa16.45■□□□□ 0.22
VAT1-208ENST00000590924 TTC36A6NLP5 189 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 COQ9O75208 318 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 FBXO45P0C2W1 286 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 ZFP36L2P47974 494 aaKnown RBP16.44■□□□□ 0.22
VAT1-208ENST00000590924 DCAF7P61962 342 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 KCNJ2P63252 427 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 PHC1P78364 1004 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 MRPS35P82673 323 aaKnown RBP16.44■□□□□ 0.22
VAT1-208ENST00000590924 HSPB3Q12988 150 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 EBPQ15125 230 aaKnown RBP16.44■□□□□ 0.22
VAT1-208ENST00000590924 TESK1Q15569 626 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 WLSQ5T9L3 541 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 PRAMEF20Q5VT98 475 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 RTL6Q6ICC9 239 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 BLOC1S3Q6QNY0 202 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 TMEM64Q6YI46 380 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 PIGWQ7Z7B1 504 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 OR7G2Q8NG99 324 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 GOT1L1Q8NHS2 421 aaPredicted RBP16.44■□□□□ 0.22
VAT1-208ENST00000590924 MOAP1Q96BY2 351 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 CCDC115Q96NT0 180 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 OR52E6Q96RD3 313 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 GAL3ST4Q96RP7 486 aa16.44■□□□□ 0.22
VAT1-208ENST00000590924 WWTR1Q9GZV5 400 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms