RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDX39A-214ENST00000590556 ATAD3BQ5T9A4 648 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 DESI1Q6ICB0 168 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 RPUSD3Q6P087 351 aaKnown RBP17.59■□□□□ 0.41
DDX39A-214ENST00000590556 FIGNL1Q6PIW4 674 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 DLEU7Q6UYE1 221 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 TREML1Q86YW5 311 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 SULF2Q8IWU5 870 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 MSRB3Q8IXL7 192 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 FBXW8Q8N3Y1 598 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 POU5F2Q8N7G0 328 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 FAM110BQ8TC76 370 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 SPPL2AQ8TCT8 520 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 XAGE5Q8WWM1 108 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 RAB8BQ92930 207 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 TMCO6Q96DC7 493 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 LRRC37BQ96QE4 947 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 EXD2Q9NVH0 621 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 SLC25A37Q9NYZ2 338 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 VAPAQ9P0L0 249 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 G3V3Y1 287 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 KLRC4-KLRK1H3BQV0 150 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 MRASO14807 208 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 ASNA1O43681 348 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 PEX1O43933 1283 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 SORBS2O94875 1100 aaKnown RBP17.58■□□□□ 0.4
DDX39A-214ENST00000590556 UNC5CO95185 931 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 IGKV1D-16P01601 117 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 PRB1P04280 392 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 CYP4B1P13584 511 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 CNR1P21554 472 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 PPIBP23284 216 aaKnown RBP17.58■□□□□ 0.4
DDX39A-214ENST00000590556 CRATP43155 626 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 MAGEA8P43361 318 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 COX20Q5RI15 118 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 DCST2Q5T1A1 773 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 CCNJQ5T5M9 372 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 REP15Q6BDI9 236 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 GALNT10Q86SR1 603 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 OR52N2Q8NGI0 321 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 BCAS4Q8TDM0 211 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 NODALQ96S42 347 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 G6PC3Q9BUM1 346 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 RAD21L1Q9H4I0 556 aa17.58■□□□□ 0.4
DDX39A-214ENST00000590556 CNOT11Q9UKZ1 510 aaKnown RBP17.58■□□□□ 0.4
DDX39A-214ENST00000590556 KALRNO60229 2985 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 TRBV5-3A0A0A0MS03 114 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 RASAL1O95294 804 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 AK1P00568 194 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 ATP6V1C1P21283 382 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 MVDP53602 400 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 GPR85P60893 370 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 INAQ16352 499 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDX39A-214ENST00000590556 PRAMEF20Q5VT98 475 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 C16orf62Q7Z3J2 963 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 MTERF4Q7Z6M4 381 aaKnown RBP17.57■□□□□ 0.4
DDX39A-214ENST00000590556 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-214ENST00000590556 PCYOX1LQ8NBM8 494 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 FAM98AQ8NCA5 519 aaKnown RBP17.57■□□□□ 0.4
DDX39A-214ENST00000590556 CMTM5Q96DZ9 223 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 CGREF1Q99674 301 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 FAM173AQ9BQD7 235 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 METTL7AQ9H8H3 244 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 DEPPQ9NTK1 212 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 FBXO34Q9NWN3 711 aa17.57■□□□□ 0.4
DDX39A-214ENST00000590556 NINQ8N4C6 2090 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 A0A0G2JMM0 328 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 A0A1W2PPB8 328 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 A0A1W2PRS3 328 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 ANKRD33BA6NCL7 494 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 TTLL8A6PVC2 850 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 KIR3DP1A8MWS1 328 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 EVPLLA8MZ36 301 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 HMGN4O00479 90 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 UTS2O95399 124 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 ETFAP13804 333 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 PRDX6P30041 224 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 LCN1P31025 176 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 CASP3P42574 277 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 MEOX1P50221 254 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 KCNJ2P63252 427 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 RGNQ15493 299 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 TRMT5Q32P41 509 aaKnown RBP17.56■□□□□ 0.4
DDX39A-214ENST00000590556 ARHGAP11BQ3KRB8 267 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 RUNDC3AQ59EK9 446 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 TBCELQ5QJ74 424 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 BICRALQ6AI39 1079 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 HEPHL1Q6MZM0 1159 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 CISD2Q8N5K1 135 aaKnown RBP17.56■□□□□ 0.4
DDX39A-214ENST00000590556 CHDHQ8NE62 594 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-214ENST00000590556 OR2M7Q8NG81 312 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 RCN3Q96D15 328 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 SDF2Q99470 211 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 GID8Q9NWU2 228 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 CORO2BQ9UQ03 480 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 BSNQ9UPA5 3926 aa17.56■□□□□ 0.4
DDX39A-214ENST00000590556 PRAMEF25A6NGN4 478 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 ICOSLGO75144 302 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 NPPAP01160 153 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms