RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SLC18A1P54219 525 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PSPHP78330 225 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PSG6Q00889 435 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PLCXD2Q0VAA5 305 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ATP6AP1LQ52LC2 224 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TMEM107Q6UX40 140 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 RPTNQ6XPR3 784 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ZNF551Q7Z340 670 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-211ENST00000590499 NUP54Q7Z3B4 507 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ZNF808Q8N4W9 903 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ZNF781Q8N8C0 355 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 CLHC1Q8NHS4 586 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PPP1R14CQ8TAE6 165 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PHF10Q8WUB8 498 aaKnown RBP10.25□□□□□ -0.77
SMAD4-211ENST00000590499 HOXB13Q92826 284 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TMBIM1Q969X1 311 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 CIDECQ96AQ7 238 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PPCDCQ96CD2 204 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 MTERF3Q96E29 417 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TMEM41AQ96HV5 264 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ZNF597Q96LX8 424 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 NODALQ96S42 347 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TMBIM4Q9HC24 238 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 QPCTLQ9NXS2 382 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TAS2R9Q9NYW1 312 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ATP6V1HQ9UI12 483 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-211ENST00000590499 RAP2CQ9Y3L5 183 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ARHGAP21Q5T5U3 1957 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TMEM120BA0PK00 339 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 E9PLN8 166 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 SCAMP2O15127 329 aaKnown RBP10.24□□□□□ -0.77
SMAD4-211ENST00000590499 SUSD5O60279 629 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 HCN1O60741 890 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 SNUPNO95149 360 aaKnown RBP10.24□□□□□ -0.77
SMAD4-211ENST00000590499 TPOP07202 933 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 MAPK1P28482 360 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 SLC1A6P48664 564 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 RPP38P78345 283 aaKnown RBP10.24□□□□□ -0.77
SMAD4-211ENST00000590499 ZNF155Q12901 538 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-211ENST00000590499 SNTA1Q13424 505 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 PTGR1Q14914 329 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 SLC10A1Q14973 349 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 PAOXQ6QHF9 649 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 C3P1Q6ZMU1 363 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 NCCRP1Q6ZVX7 275 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-211ENST00000590499 MRGPRGQ86SM5 289 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 LIX1Q8N485 282 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 MARVELD2Q8N4S9 558 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 OR4N2Q8NGD1 307 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 VKORC1Q9BQB6 163 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 C1orf50Q9BV19 199 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 ACKR4Q9NPB9 350 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 KCNK9Q9NPC2 374 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 ACSS1Q9NUB1 689 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-211ENST00000590499 DDX18Q9NVP1 670 aaKnown RBP10.24□□□□□ -0.77
SMAD4-211ENST00000590499 ASIC5Q9NY37 505 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 NTMQ9P121 344 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 SPRR3Q9UBC9 169 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 C15orf41Q9Y2V0 281 aa10.24□□□□□ -0.77
SMAD4-211ENST00000590499 ABCA12Q86UK0 2595 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 PCNX3Q9H6A9 2034 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 PRAMEF25A6NGN4 478 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 NPIPA2E9PIF3 369 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 NPIPA3F8WFD2 350 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 HPNP05981 417 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 ESRRAP11474 423 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 PRPS2P11908 318 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 AGAP20933 346 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 PTPN6P29350 595 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 MAP3K8P41279 467 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 CDK9P50750 372 aaKnown RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 C21orf58P58505 322 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 MAGOHP61326 146 aaKnown RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 BST1Q10588 318 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 HSPB3Q12988 150 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 ART3Q13508 389 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 CASP8Q14790 479 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 MLC1Q15049 377 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 CDSNQ15517 529 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 PDCD2Q16342 344 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 SMU1Q2TAY7 513 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 IL23RQ5VWK5 629 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 TMEM198Q66K66 360 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 TIGD3Q6B0B8 471 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 SLC30A6Q6NXT4 461 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 R3HCC1LQ7Z5L2 792 aaKnown RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 SLC44A2Q8IWA5 706 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 RIMKLAQ8IXN7 391 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 ANKRD42Q8N9B4 389 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 FNDC5Q8NAU1 212 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 OR7A2PQ8NGA2 310 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 ZFP28Q8NHY6 868 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 TUBGCP3Q96CW5 907 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 GIMAP5Q96F15 307 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 ZBED6CLQ96FA7 236 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 JSRP1Q96MG2 331 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 COL21A1Q96P44 957 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 LMF2Q9BU23 707 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms