RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 FCMRO60667 390 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CPNE3O75131 537 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SNAP29O95721 258 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CYC1P08574 325 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CD59P13987 128 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CDH2P19022 906 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 GABRA3P34903 492 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PGDP52209 483 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SMIM11AP58511 58 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 OCA2Q04671 838 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PPP1R8Q12972 351 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 LARS2Q15031 903 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CYP27C1Q4G0S4 372 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 VWA2Q5GFL6 755 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 ZNF385CQ66K41 422 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 RBM44Q6ZP01 1051 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 OLIG3Q7RTU3 272 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 B3GNT8Q7Z7M8 397 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 TMEM151BQ8IW70 566 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 ZNF615Q8N8J6 731 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 BMPERQ8N8U9 685 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 OR4C15Q8NGM1 316 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 OR52P1PQ8NH57 321 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 OR14A16Q8NHC5 309 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PTPMT1Q8WUK0 201 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 DAZLQ92904 295 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 TSLPQ969D9 159 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 DHRS1Q96LJ7 313 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CNBD2Q96M20 576 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 ARHGDIGQ99819 225 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PSD2Q9BQI7 771 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 EDEM2Q9BV94 578 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 VN1R1Q9GZP7 353 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 EVA1AQ9H8M9 152 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SMURF2Q9HAU4 748 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 Q9N2J8 555 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 TMEM9BQ9NQ34 198 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 FBXO8Q9NRD0 319 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PNO1Q9NRX1 252 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SLC22A11Q9NSA0 550 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 OCIAD1Q9NX40 245 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PDP1Q9P0J1 537 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CTSFQ9UBX1 484 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 MKL2Q9ULH7 1088 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CLCA3PQ9Y6N3 262 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 NINQ8N4C6 2090 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 TMEM8BA6NDV4 472 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 AGAP5A6NIR3 686 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 HRKO00198 91 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 POLR1CO15160 346 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 HS6ST1O60243 411 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 KCNK2O95069 426 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 GADD45GO95257 159 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 DBIP07108 87 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 MYF6P23409 242 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 IGFBP5P24593 272 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 LIMS1P48059 325 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CHN2P52757 468 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CDH12P55289 794 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 ADARB1P78563 741 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 MC2RQ01718 297 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 ILKQ13418 452 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SF3A2Q15428 464 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 NSDHLQ15738 373 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 LIN52Q52LA3 116 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 COLEC12Q5KU26 742 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 TTC23Q5W5X9 447 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 KDM4DQ6B0I6 523 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 TCTN3Q6NUS6 607 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 FAHD1Q6P587 224 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 UGT2A3Q6UWM9 527 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SLC38A9Q8NBW4 561 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 C16orf52Q8NHV5 167 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 VANGL1Q8TAA9 524 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 STT3BQ8TCJ2 826 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 GIPC3Q8TF64 312 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PHF10Q8WUB8 498 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CYGBQ8WWM9 190 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 PIK3R3Q92569 461 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SENP5Q96HI0 755 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 SLC46A1Q96NT5 459 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 QRSL1Q9H0R6 528 aaKnown RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 RXFP3Q9NSD7 469 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 ACER3Q9NUN7 267 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 AKAP7Q9P0M2 348 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 KIF17Q9P2E2 1029 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 MKLN1Q9UL63 735 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 ZNF443Q9Y2A4 671 aaPredicted RBP11.2□□□□□ -0.62
CCBE1-203ENST00000589116 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 ASPMQ8IZT6 3477 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 B4E171 279 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 TMX2-CTNND1H3BSU7 103 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 J3KTA2 159 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 EPPINO95925 133 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 CLPSP04118 112 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 IGKV3-11P04433 115 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 ZGLP1P0C6A0 271 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 ANXA8P13928 327 aa11.19□□□□□ -0.62
CCBE1-203ENST00000589116 IL7RP16871 459 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms