RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TAOK1Q7L7X3 1001 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 P4HA3Q7Z4N8 544 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 UBQLNLQ8IYU4 475 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 FNDC9Q8TBE3 224 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 EXOSC8Q96B26 276 aaKnown RBP16.59■□□□□ 0.25
CCDC43-204ENST00000588687 PERPQ96FX8 193 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 FAM111AQ96PZ2 611 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 PAFAH2Q99487 392 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 MED18Q9BUE0 208 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 GSX2Q9BZM3 304 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 ZNF175Q9Y473 711 aa16.59■□□□□ 0.25
CCDC43-204ENST00000588687 PCDH7O60245 1069 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 PSMG1O95456 288 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 FPR1P21462 350 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 PHBP35232 272 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 HSD17B3P37058 310 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 HTR6P50406 440 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 CLDN20P56880 219 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 SIRPAP78324 504 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 PRSS53Q2L4Q9 553 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 ERCC6LQ2NKX8 1250 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 C20orf204Q6ZNR8 217 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 SLC44A2Q8IWA5 706 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-204ENST00000588687 CDYL2Q8N8U2 506 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 OR4K17Q8NGC6 315 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 DTNBP1Q96EV8 351 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF845Q96IR2 970 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-204ENST00000588687 PINK1Q9BXM7 581 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 CDC42EP4Q9H3Q1 356 aaKnown RBP16.58■□□□□ 0.24
CCDC43-204ENST00000588687 DSN1Q9H410 356 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 ELOVL5Q9NYP7 299 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF337Q9Y3M9 751 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 PRR14LQ5THK1 2151 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 USF3Q68DE3 2245 aa16.58■□□□□ 0.24
CCDC43-204ENST00000588687 OR2M5A3KFT3 312 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 SCO2O43819 266 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 TNFRSF21O75509 655 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 THBDP07204 575 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 POU2F1P14859 743 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 PCSK6P29122 969 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 CLCQ05315 142 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 GANABQ14697 944 aaKnown RBP16.57■□□□□ 0.24
CCDC43-204ENST00000588687 TMEM44Q2T9K0 475 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 RAET1LQ5VY80 246 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 GALNT18Q6P9A2 607 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 METTL25Q8N6Q8 603 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 DCAKDQ8WVC6 231 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 CAVIN3Q969G5 261 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 MTBPQ96DY7 904 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 APIPQ96GX9 242 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 TMEM237Q96Q45 408 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF382Q96SR6 550 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 BDH2Q9BUT1 245 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 PFDN4Q9NQP4 134 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 SLC35C2Q9NQQ7 365 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 NMRK1Q9NWW6 199 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 PPP4R1LQ9P1A2 415 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 ADAM21Q9UKJ8 722 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 ABCG2Q9UNQ0 655 aa16.57■□□□□ 0.24
CCDC43-204ENST00000588687 INAFM1C9JVW0 142 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 C16orf97H3BN30 126 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 SMAD7O15105 426 aaKnown RBP16.56■□□□□ 0.24
CCDC43-204ENST00000588687 AQP8O94778 261 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 ESRRBO95718 433 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 INHBAP08476 426 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 PAX1P15863 534 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 HK1P19367 917 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 TIA1P31483 386 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC43-204ENST00000588687 KRT20P35900 424 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 PTH2RP49190 550 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 OCRLQ01968 901 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 KRTAP1-1Q07627 177 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 PON3Q15166 354 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 UNC50Q53HI1 259 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 GGNQ86UU5 652 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 SAMD14Q8IZD0 417 aaPredicted RBP16.56■□□□□ 0.24
CCDC43-204ENST00000588687 FAM9CQ8IZT9 166 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 MEIOBQ8N635 442 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF610Q8N9Z0 462 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 OR5M1Q8NGP8 315 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 C16orf78Q8WTQ4 265 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 C1GALT1C1Q96EU7 318 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 STMN4Q9H169 189 aaPredicted RBP16.56■□□□□ 0.24
CCDC43-204ENST00000588687 MED11Q9P086 117 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF180Q9UJW8 692 aa16.56■□□□□ 0.24
CCDC43-204ENST00000588687 MYO1GB0I1T2 1018 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 SEC14L5O43304 696 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 SERPINB9P50453 376 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 MRPS22P82650 360 aaKnown RBP16.55■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF155Q12901 538 aaPredicted RBP16.55■□□□□ 0.24
CCDC43-204ENST00000588687 CAPRIN1Q14444 709 aaKnown RBP16.55■□□□□ 0.24
CCDC43-204ENST00000588687 RASA2Q15283 850 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 SPIN4Q56A73 249 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 ZNF678Q5SXM1 525 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.55■□□□□ 0.244e-15■■■□□ 18.8
CCDC43-204ENST00000588687 ZC3HAV1LQ96H79 300 aaKnown RBP16.55■□□□□ 0.24
CCDC43-204ENST00000588687 SLC39A3Q9BRY0 314 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 EBPLQ9BY08 206 aa16.55■□□□□ 0.24
CCDC43-204ENST00000588687 FAM120CQ9NX05 1096 aaKnown RBP16.55■□□□□ 0.24
CCDC43-204ENST00000588687 SIRT5Q9NXA8 310 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms