RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZNF620Q6ZNG0 422 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 PLEKHM3Q6ZWE6 761 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 VASH1Q7L8A9 365 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-206ENST00000587730 C16orf62Q7Z3J2 963 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 SYT14Q8NB59 555 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 OR7G1Q8NGA0 311 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 MS4A6EQ96DS6 147 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 FERD3LQ96RJ6 166 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 TNFRSF10DQ9UBN6 386 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 GPR52Q9Y2T5 361 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 ZNF780BQ9Y6R6 833 aa17.41■□□□□ 0.38
DDX39A-206ENST00000587730 A0A0B4J293 547 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 KLF4O43474 513 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 LCMT2O60294 686 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ERAL1O75616 437 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 FAM157BP0CG42 384 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 NDUFV2P19404 249 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 CELP19835 753 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ATP5A1P25705 553 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 PKLRP30613 574 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 RGS8P57771 180 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 SHC2P98077 582 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ZNF155Q12901 538 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 AGERQ15109 404 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 EIPR1Q53HC9 387 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 RPL13AP3Q6NVV1 102 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ZNF322Q6U7Q0 402 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 CREB3L2Q70SY1 520 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ADGRD2Q7Z7M1 963 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ACOT4Q8N9L9 421 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 LINC01555Q8NAE3 123 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TMEM145Q8NBT3 493 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 OR2A1Q8NGT9 310 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 RNF31Q96EP0 1072 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 FAM46AQ96IP4 442 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ZSWIM3Q96MP5 696 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 FYTTD1Q96QD9 318 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TIMM29Q9BSF4 260 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 MRPS30Q9NP92 439 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 SEMA4GQ9NTN9 838 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 DPP7Q9UHL4 492 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 PRKAB1Q9Y478 270 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ALG5Q9Y673 324 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 CCDC88CQ9P219 2028 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 PRR23AA6NEV1 266 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 ERI3O43414 337 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 F3P13726 295 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TRIM23P36406 574 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 P2RY2P41231 377 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 STXBP1P61764 594 aaKnown RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 RRAS2P62070 204 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 LHFPL3Q86UP9 236 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TPRA1Q86W33 373 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 LRRC28Q86X40 367 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TRIM48Q8IWZ4 208 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 YIPF7Q8N8F6 280 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 NUP43Q8NFH3 380 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 SUSD6Q92537 303 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TTC9Q92623 222 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 NXPE3Q969Y0 559 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 CNRIP1Q96F85 164 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TMED9Q9BVK6 235 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TEX101Q9BY14 249 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 C11orf49Q9H6J7 331 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 TBC1D17Q9HA65 648 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 PRDM7Q9NQW5 492 aa17.4■□□□□ 0.38
DDX39A-206ENST00000587730 A0A1W2PR48 441 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 PRRT4C9JH25 899 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 LINC00271P0C7V0 271 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 GNSP15586 552 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 PAICSP22234 425 aaKnown RBP17.39■□□□□ 0.37
DDX39A-206ENST00000587730 TAS2R43P59537 309 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 RACK1P63244 317 aaKnown RBP17.39■□□□□ 0.37
DDX39A-206ENST00000587730 HTRA4P83105 476 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-206ENST00000587730 C19orf57Q0VDD7 668 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 MRPL28Q13084 256 aaKnown RBP17.39■□□□□ 0.37
DDX39A-206ENST00000587730 FAM214AQ32MH5 1076 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 HBMQ6B0K9 141 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 C12orf40Q86WS4 652 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 ACBD7Q8N6N7 88 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 BRIX1Q8TDN6 353 aaKnown RBP17.39■□□□□ 0.37
DDX39A-206ENST00000587730 ELP4Q96EB1 424 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDX39A-206ENST00000587730 MTHFD2LQ9H903 347 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-206ENST00000587730 CNIH4Q9P003 139 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 NTMQ9P121 344 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 CES1P1Q9UKY3 287 aa17.39■□□□□ 0.37
DDX39A-206ENST00000587730 TBC1D3KA0A087X1G2 549 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 TBC1D3BA6NDS4 549 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 TBC1D3FA6NER0 549 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-206ENST00000587730 CPSF4LA6NMK7 179 aaKnown RBP17.38■□□□□ 0.37
DDX39A-206ENST00000587730 AIFM1O95831 613 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 PCCBP05166 539 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 PRKCAP17252 672 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 RBMS1P29558 406 aaKnown RBP17.38■□□□□ 0.37
DDX39A-206ENST00000587730 BCL6P41182 706 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 EFR3AQ14156 821 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF234Q14588 700 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 TBC1D3GQ6DHY5 549 aa17.38■□□□□ 0.37
DDX39A-206ENST00000587730 HEPHL1Q6MZM0 1159 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms