RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 KRT6CP48668 564 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 SERPINB9P50453 376 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 SUCLG1P53597 346 aaKnown RBP12.67□□□□□ -0.38
DNMT1-213ENST00000587604 SLC7A5Q01650 507 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 CLCQ05315 142 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 CSTF3Q12996 717 aaKnown RBP12.67□□□□□ -0.38
DNMT1-213ENST00000587604 GANABQ14697 944 aaKnown RBP12.67□□□□□ -0.38
DNMT1-213ENST00000587604 HEPACAMQ14CZ8 416 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 UBAP2Q5T6F2 1119 aaKnown RBP12.67□□□□□ -0.38
DNMT1-213ENST00000587604 RELL1Q8IUW5 271 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 SLC44A2Q8IWA5 706 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-213ENST00000587604 CTAGE4Q8IX94 777 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 TMEM151AQ8N4L1 468 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 OR2M3Q8NG83 312 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 PERPQ96FX8 193 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 MARK4Q96L34 752 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 STMN4Q9H169 189 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-213ENST00000587604 RNF122Q9H9V4 155 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 SLC35C2Q9NQQ7 365 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 SDHAF3Q9NRP4 125 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 GIMAP4Q9NUV9 329 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 ZNF337Q9Y3M9 751 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 ZNF175Q9Y473 711 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 OR10H1Q9Y4A9 318 aa12.67□□□□□ -0.38
DNMT1-213ENST00000587604 GNG14A0A1W2PPG7 69 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 A8MT66 165 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 H0YC42 278 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
DNMT1-213ENST00000587604 PCDH7O60245 1069 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 FADS1O60427 444 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 ULK1O75385 1050 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 HK1P19367 917 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 PCSK6P29122 969 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 CASQ1P31415 396 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 TPD52P55327 224 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-213ENST00000587604 SIRPAP78324 504 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 RAE1P78406 368 aaKnown RBP12.66□□□□□ -0.38
DNMT1-213ENST00000587604 PSG6Q00889 435 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 OCRLQ01968 901 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 RASA2Q15283 850 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 CYP27C1Q4G0S4 372 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 TCHHL1Q5QJ38 904 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-213ENST00000587604 RAET1LQ5VY80 246 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 FAM219BQ5XKK7 198 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 ZNF550Q7Z398 422 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 ZNF572Q7Z3I7 529 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-213ENST00000587604 FAM9CQ8IZT9 166 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 CDYL2Q8N8U2 506 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 ZNF610Q8N9Z0 462 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 OR7G2Q8NG99 324 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 PPP1R14CQ8TAE6 165 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 UHMK1Q8TAS1 419 aaKnown RBP12.66□□□□□ -0.38
DNMT1-213ENST00000587604 CAVIN3Q969G5 261 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 MDFIQ99750 246 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 PINK1Q9BXM7 581 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 GSX2Q9BZM3 304 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 SHCBP1LQ9BZQ2 653 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 PTGES2Q9H7Z7 377 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 MED11Q9P086 117 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 SENP1Q9P0U3 644 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 NFU1Q9UMS0 254 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 ABCG2Q9UNQ0 655 aa12.66□□□□□ -0.38
DNMT1-213ENST00000587604 OR2M5A3KFT3 312 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 TRIM64A6NGJ6 449 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 TRIM64BA6NI03 449 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 KIAA1324LA8MWY0 1029 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-213ENST00000587604 SCO2O43819 266 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 CHN1P15882 459 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 TBXA2RP21731 343 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 LOXP28300 417 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-213ENST00000587604 ACSM2AQ08AH3 577 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 PON3Q15166 354 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 GLYR1Q49A26 553 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-213ENST00000587604 SPIN4Q56A73 249 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 ACSM2BQ68CK6 577 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 C22orf34Q6ZV56 151 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 FNDC9Q8TBE3 224 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 METTL6Q8TCB7 284 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 C16orf78Q8WTQ4 265 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 APIPQ96GX9 242 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 ZC3HAV1LQ96H79 300 aaKnown RBP12.65□□□□□ -0.38
DNMT1-213ENST00000587604 ZNF382Q96SR6 550 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 PAFAH2Q99487 392 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 PIGQQ9BRB3 760 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 ACPTQ9BZG2 426 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 PROCRQ9UNN8 238 aa12.65□□□□□ -0.38
DNMT1-213ENST00000587604 A0A087WV62 115 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 H3BML4 177 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 SEC14L5O43304 696 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 COQ9O75208 318 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 SUPT7LO94864 414 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 SLITRK5O94991 958 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 CNOT4O95628 575 aaKnown RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 PAX1P15863 534 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 GSTM5P46439 218 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 PTH2RP49190 550 aa12.64□□□□□ -0.39
DNMT1-213ENST00000587604 CLK3P49761 638 aaKnown RBP12.64□□□□□ -0.39
DNMT1-213ENST00000587604 CLDN20P56880 219 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms