RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 A0A0G2JPF8 293 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 C17orf105B2RV13 164 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 HNRNPCL2B2RXH8 293 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 HNRNPCL3B7ZW38 293 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 G3V2T6 193 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 H0YJX3 145 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 HS6ST1O60243 411 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 EPPINO95925 133 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 AGR2O95994 175 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 CLPSP04118 112 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 IFNW1P05000 195 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PABPC4LP0CB38 370 aaKnown RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 UBTFL6P0CB48 400 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 HNRNPCL4P0DMR1 293 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 ETS2P15036 469 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PRKACGP22612 351 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 CSTF2P33240 577 aaKnown RBP eCLIP9.45□□□□□ -0.9
APOC1-201ENST00000586638 RNF144AP50876 292 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 ALDH3A2P51648 485 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 UCNP55089 124 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 TMPRSS3P57727 454 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 POU6F2P78424 691 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 GK3PQ14409 553 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 GANABQ14697 944 aaKnown RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 NNATQ16517 81 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 ARHGAP11BQ3KRB8 267 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PRAMEF8Q5VWM4 474 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PRAMEF7Q5VXH5 474 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 TYW3Q6IPR3 259 aaKnown RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 SHQ1Q6PI26 577 aaKnown RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 FIGNL1Q6PIW4 674 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 ISLR2Q6UXK2 745 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 NPSR1Q6W5P4 371 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 DEF8Q6ZN54 512 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 LANCL3Q6ZV70 420 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PPP1R3BQ86XI6 285 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 VRK2Q86Y07 508 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 ZDHHC13Q8IUH4 622 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 CHERPQ8IWX8 916 aaKnown RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 SLC38A9Q8NBW4 561 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 CHDHQ8NE62 594 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 MAGEE2Q8TD90 523 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 GPR151Q8TDV0 419 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 CYGBQ8WWM9 190 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PMEPA1Q969W9 287 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 RMND5BQ96G75 393 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 RBM18Q96H35 190 aaKnown RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 ZNF300Q96RE9 604 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 STACQ99469 402 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 WFDC6Q9BQY6 131 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 LMF2Q9BU23 707 aaKnown RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 ADI1Q9BV57 179 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 OSBPL11Q9BXB4 747 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 ITPAQ9BY32 194 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 VN1R1Q9GZP7 353 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 GABARAPL1Q9H0R8 117 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PIGUQ9H490 435 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 Q9H521 79 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 SOX17Q9H6I2 414 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 CPNE5Q9HCH3 593 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 MKKSQ9NPJ1 570 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 C8orf4Q9NR00 106 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 FBXO34Q9NWN3 711 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 SMPD3Q9NY59 655 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 LIPT1Q9Y234 373 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 ZNF443Q9Y2A4 671 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 HEMK1Q9Y5R4 338 aaPredicted RBP9.45□□□□□ -0.9
APOC1-201ENST00000586638 ENPP4Q9Y6X5 453 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 KNTC1P50748 2209 aa9.45□□□□□ -0.9
APOC1-201ENST00000586638 PIEZO2Q9H5I5 2752 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 DUXAA6NLW8 204 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 TNFRSF11BO00300 401 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 ADAMDEC1O15204 470 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 FRS3O43559 492 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 PRAMEF2O60811 474 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 SERPINB7O75635 380 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 DNAJB5O75953 348 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 NKX2-2O95096 273 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 SNAP29O95721 258 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 HPRP00739 348 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 ALPLP05186 524 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 GP1BAP07359 652 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 THRBP10828 461 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 TNNI3P19429 210 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 FUT4P22083 530 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 DNAJA1P31689 397 aaKnown RBP9.44□□□□□ -0.9
APOC1-201ENST00000586638 GABRA3P34903 492 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 MAP3K8P41279 467 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 RFX3P48380 749 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 EMDP50402 254 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 CDH12P55289 794 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 PPP2R2BQ00005 443 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 KCNC4Q03721 635 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 ZFP36L1Q07352 338 aaKnown RBP9.44□□□□□ -0.9
APOC1-201ENST00000586638 FUT7Q11130 342 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 MED21Q13503 144 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 TRA2AQ13595 282 aaKnown RBP eCLIP9.44□□□□□ -0.9
APOC1-201ENST00000586638 PDK3Q15120 406 aa9.44□□□□□ -0.9
APOC1-201ENST00000586638 ZIK1Q3SY52 487 aaPredicted RBP9.44□□□□□ -0.9
APOC1-201ENST00000586638 CDCP2Q5VXM1 449 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms