RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 UBTD1Q9HAC8 227 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 MED11Q9P086 117 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 PRODH2Q9UF12 536 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 NDRG3Q9UGV2 375 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 DKKL1Q9UK85 242 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 PACSIN3Q9UKS6 424 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 EIF3LQ9Y262 564 aaKnown RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 SCO2O43819 266 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 SMPD2O60906 423 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 ESRRBO95718 433 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 IL3P08700 152 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 RPS17P08708 135 aaKnown RBP10.49□□□□□ -0.73
LIG3-207ENST00000586119 RBP1P09455 135 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 COL6A2P12110 1019 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 DPP4P27487 766 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 CCKARP32238 428 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 GCKP35557 465 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 HTR6P50406 440 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 DIO3P55073 304 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 GAB1Q13480 694 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 GGTA1PQ4G0N0 100 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 UNC50Q53HI1 259 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 METTL2BQ6P1Q9 378 aaKnown RBP10.49□□□□□ -0.73
LIG3-207ENST00000586119 SCIMPQ6UWF3 145 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 LARP4Q71RC2 724 aaKnown RBP eCLIP10.49□□□□□ -0.73
LIG3-207ENST00000586119 SLC44A2Q8IWA5 706 aaPredicted RBP10.49□□□□□ -0.73
LIG3-207ENST00000586119 OR7G2Q8NG99 324 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 PPP1R14CQ8TAE6 165 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 RNF138Q8WVD3 245 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 TMCO6Q96DC7 493 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 PERPQ96FX8 193 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 APIPQ96GX9 242 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 ZNF845Q96IR2 970 aaPredicted RBP10.49□□□□□ -0.73
LIG3-207ENST00000586119 COX4I2Q96KJ9 171 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 MARK4Q96L34 752 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 VSTM2LQ96N03 204 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 ZFP3Q96NJ6 502 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 FAM111AQ96PZ2 611 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 FOLH1BQ9HBA9 442 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 PFDN4Q9NQP4 134 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 LGALS13Q9UHV8 139 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 PSME2Q9UL46 239 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 DLGAP4Q9Y2H0 992 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 ZNF337Q9Y3M9 751 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 ZNF780BQ9Y6R6 833 aa10.49□□□□□ -0.73
LIG3-207ENST00000586119 A8MT66 165 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 SHISA8B8ZZ34 492 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 MANBAO00462 879 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 MSTNO14793 375 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 SMIM24O75264 130 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 GUCY1B2O75343 617 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 GOSR1O95249 250 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 CGAP01215 116 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 HK1P19367 917 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 CHMP24386 653 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 CD79BP40259 229 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 MC3RP41968 323 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 BTKQ06187 659 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 CASP8Q14790 479 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 ACKR1Q16570 336 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 TSNAXIP1Q2TAA8 658 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 SH2D4BQ5SQS7 431 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 AAGABQ6PD74 315 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 YTHDF3Q7Z739 585 aaKnown RBP10.48□□□□□ -0.73
LIG3-207ENST00000586119 CDYL2Q8N8U2 506 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 OR2M3Q8NG83 312 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 OR2W6PQ8NHA6 318 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 EPS8L3Q8TE67 593 aaKnown RBP10.48□□□□□ -0.73
LIG3-207ENST00000586119 MZB1Q8WU39 189 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 NUDT8Q8WV74 236 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 BTBD9Q96Q07 612 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 EBPLQ9BY08 206 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 VPS29Q9UBQ0 182 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 MRPS18CQ9Y3D5 142 aaKnown RBP10.48□□□□□ -0.73
LIG3-207ENST00000586119 ZANQ9Y493 2812 aa10.48□□□□□ -0.73
LIG3-207ENST00000586119 UQCRHLA0A096LP55 91 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 TLDC2A0PJX2 215 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 SLC22A20A6NK97 555 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 INAFM1C9JVW0 142 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 SEC14L5O43304 696 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 ARHGEF9O43307 516 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 GMFGO60234 142 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 PLAUP00749 431 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 GSTA1P08263 222 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 POU2F1P14859 743 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 CRYGSP22914 178 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 UGT2B10P36537 528 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 PNLIPRP2P54317 469 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 CLDN20P56880 219 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 TRA2BP62995 288 aaKnown RBP10.47□□□□□ -0.73
LIG3-207ENST00000586119 PSG6Q00889 435 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 CLCQ05315 142 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 ZNF844Q08AG5 666 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 STX5Q13190 355 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 HDXQ7Z353 690 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 FADS6Q8N9I5 356 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 OR4K17Q8NGC6 315 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 FNDC9Q8TBE3 224 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 ZNF675Q8TD23 568 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 C16orf78Q8WTQ4 265 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms