RNA–Protein interactions for RNA: ENST00000586039.1

PKN1-205, Transcript of protein kinase N1, human

TSL 2

Gene PKN1, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-205	ENST00000586039	CXorf21	Q9HAI6	301 aa		13.91	□□□□□ -0.18
PKN1-205	ENST00000586039	NMRAL1	Q9HBL8	299 aa		13.91	□□□□□ -0.18
PKN1-205	ENST00000586039	FBXL2	Q9UKC9	423 aa		13.91	□□□□□ -0.18
PKN1-205	ENST00000586039	LOC100289279	A0A1B0GTE1	492 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	SLC35F4	A4IF30	521 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	SAP18	O00422	153 aa	Known RBP	13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	KERA	O60938	352 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	SH3BGRL	O75368	114 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	STK16	O75716	305 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	AIFM1	O95831	613 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	ITGA2	P17301	1181 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	CD22	P20273	847 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	MAGEA12	P43365	314 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	VSNL1	P62760	191 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	LSM11	P83369	360 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	PLCXD2	Q0VAA5	305 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	DOC2A	Q14183	400 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	SULT1C3	Q6IMI6	304 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	DTX2	Q86UW9	622 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	STK32C	Q86UX6	486 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	DEPDC4	Q8N2C3	294 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	C3orf56	Q8N813	242 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	PDPR	Q8NCN5	879 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	KBTBD8	Q8NFY9	601 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	FAM168A	Q92567	244 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	PROX1	Q92786	737 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	ZBTB9	Q96C00	473 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	OMA1	Q96E52	524 aa		13.9	□□□□□ -0.18
PKN1-205	ENST00000586039	SMIM23	A6NLE4	172 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	GOLGA8R	I6L899	631 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	SEC14L5	O43304	696 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	ZIC3	O60481	467 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	KLHL2	O95198	593 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	PLG	P00747	810 aa	Predicted RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	TGFB1	P01137	390 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	S100B	P04271	92 aa	Predicted RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	PSMB1	P20618	241 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	GPX3	P22352	226 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	USF1	P22415	310 aa	Predicted RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	GGT5	P36269	586 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	SUCLG1	P53597	346 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	CTBP2	P56545	445 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	CLDN15	P56746	228 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	RPS3A	P61247	264 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	HMGCS1	Q01581	520 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	ILF2	Q12905	390 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	NNAT	Q16517	81 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	PFKFB4	Q16877	469 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	C6orf163	Q5TEZ5	329 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	AGAP6	Q5VW22	663 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	RPS27L	Q71UM5	84 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	RNF175	Q8N4F7	328 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	STEAP2	Q8NFT2	490 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	ZNF473	Q8WTR7	871 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	GFM2	Q969S9	779 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	S100PBP	Q96BU1	408 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	TMCO6	Q96DC7	493 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	SORBS1	Q9BX66	1292 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	CD244	Q9BZW8	370 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	CISD1	Q9NZ45	108 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	NUDT4	Q9NZJ9	180 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	CPSF2	Q9P2I0	782 aa	Known RBP	13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	TBK1	Q9UHD2	729 aa		13.89	□□□□□ -0.19
PKN1-205	ENST00000586039	GLOD5	A6NK44	160 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	WASHC1	A8K0Z3	465 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039		H0YC42	278 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	UGT2B11	O75310	529 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	ABHD2	P08910	425 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	SERPINB9	P50453	376 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	TPD52	P55327	224 aa	Predicted RBP	13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	HNRNPH2	P55795	449 aa	Known RBP	13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	B3GALT5-AS1	P59052	145 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	ZNF844	Q08AG5	666 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	SGCB	Q16585	318 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	FAM83E	Q2M2I3	478 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	CTU2	Q2VPK5	515 aa	Known RBP	13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	TECRL	Q5HYJ1	363 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	OR5M10	Q6IEU7	315 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	TEX9	Q8N6V9	391 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	ZNF525	Q8N782	197 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	GBP7	Q8N8V2	638 aa	Predicted RBP	13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	OR7G1	Q8NGA0	311 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	OR2W6P	Q8NHA6	318 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	UBE2E3	Q969T4	207 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	PHF21B	Q96EK2	531 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	WDR34	Q96EX3	536 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	CMTM7	Q96FZ5	175 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	CENPK	Q9BS16	269 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	PRRG4	Q9BZD6	226 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	TRIM2	Q9C040	744 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	WDR41	Q9HAD4	459 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	EML4	Q9HC35	981 aa	Known RBP	13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	EHD3	Q9NZN3	535 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	ZNF180	Q9UJW8	692 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039	CFL2	Q9Y281	166 aa		13.88	□□□□□ -0.19
PKN1-205	ENST00000586039		A0A1W2PPM1	405 aa		13.87	□□□□□ -0.19
PKN1-205	ENST00000586039	ACOX3	O15254	700 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms