RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CSTF3Q12996 717 aaKnown RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 ERCC6LQ2NKX8 1250 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 GLYR1Q49A26 553 aaPredicted RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 CYP27C1Q4G0S4 372 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 GALNT18Q6P9A2 607 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 C20orf204Q6ZNR8 217 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 TAOK1Q7L7X3 1001 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 UBQLNLQ8IYU4 475 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 MEIOBQ8N635 442 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 C16orf78Q8WTQ4 265 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 EFHD2Q96C19 240 aaPredicted RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 MTBPQ96DY7 904 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 ZNF845Q96IR2 970 aaPredicted RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 CCL19Q99731 98 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 GSX2Q9BZM3 304 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 STMN4Q9H169 189 aaPredicted RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 SLC35C2Q9NQQ7 365 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 MED11Q9P086 117 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 EXPH5Q8NEV8 1989 aa13.03□□□□□ -0.32
SDF2-202ENST00000585428 NSD1Q96L73 2696 aaPredicted RBP13.03□□□□□ -0.32
SDF2-202ENST00000585428 FBN1P35555 2871 aaKnown RBP13.02□□□□□ -0.33
SDF2-202ENST00000585428 TRIM64A6NGJ6 449 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 TRIM64BA6NI03 449 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.33
SDF2-202ENST00000585428 KLF4O43474 513 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 ULK1O75385 1050 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 ESRRBO95718 433 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 KRT6AP02538 564 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 KRT6BP04259 564 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 HK1P19367 917 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 TBXA2RP21731 343 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 TCEA1P23193 301 aaKnown RBP13.02□□□□□ -0.33
SDF2-202ENST00000585428 EVI2BP34910 448 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 KRT6CP48668 564 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 SERPINB9P50453 376 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 PRSS53Q2L4Q9 553 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 UNC50Q53HI1 259 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 TCHHL1Q5QJ38 904 aaPredicted RBP13.02□□□□□ -0.33
SDF2-202ENST00000585428 SH2D5Q6ZV89 423 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 ZNF550Q7Z398 422 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 OR4K17Q8NGC6 315 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 UHMK1Q8TAS1 419 aaKnown RBP13.02□□□□□ -0.33
SDF2-202ENST00000585428 FNDC9Q8TBE3 224 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 DUSP19Q8WTR2 217 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 EXOSC8Q96B26 276 aaKnown RBP13.02□□□□□ -0.33
SDF2-202ENST00000585428 PERPQ96FX8 193 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 APIPQ96GX9 242 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 PIGQQ9BRB3 760 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 PINK1Q9BXM7 581 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 ACPTQ9BZG2 426 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 UBTD1Q9HAC8 227 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 PFDN4Q9NQP4 134 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 SDHAF3Q9NRP4 125 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 SIRT5Q9NXA8 310 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 ZNF175Q9Y473 711 aa13.02□□□□□ -0.33
SDF2-202ENST00000585428 MED12LQ86YW9 2145 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 A0A087WV62 115 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 OR2M5A3KFT3 312 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 MYO1GB0I1T2 1018 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 PCDH7O60245 1069 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 THBDP07204 575 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 INHBAP08476 426 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 IL11P20809 199 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 PCSK6P29122 969 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 CASQ1P31415 396 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 CLDN20P56880 219 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 SIRPAP78324 504 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 FGFBP1Q14512 234 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 GANABQ14697 944 aaKnown RBP13.01□□□□□ -0.33
SDF2-202ENST00000585428 PON3Q15166 354 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 RASA2Q15283 850 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 TMEM44Q2T9K0 475 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 ZNF678Q5SXM1 525 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 ANKRD34AQ69YU3 496 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 FAM214BQ7L5A3 538 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 METTL25Q8N6Q8 603 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 OR5M1Q8NGP8 315 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.01□□□□□ -0.33
SDF2-202ENST00000585428 DCAKDQ8WVC6 231 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 CAVIN3Q969G5 261 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 TAS2R7Q9NYW3 318 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 FLRT3Q9NZU0 649 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 DMGDHQ9UI17 866 aaKnown RBP13.01□□□□□ -0.33
SDF2-202ENST00000585428 ZNF180Q9UJW8 692 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 C19orf53Q9UNZ5 99 aaPredicted RBP13.01□□□□□ -0.33
SDF2-202ENST00000585428 OR10H1Q9Y4A9 318 aa13.01□□□□□ -0.33
SDF2-202ENST00000585428 GNG14A0A1W2PPG7 69 aa13□□□□□ -0.33
SDF2-202ENST00000585428 SCO2O43819 266 aa13□□□□□ -0.33
SDF2-202ENST00000585428 AQP8O94778 261 aa13□□□□□ -0.33
SDF2-202ENST00000585428 SUPT7LO94864 414 aa13□□□□□ -0.33
SDF2-202ENST00000585428 CNOT4O95628 575 aaKnown RBP13□□□□□ -0.33
SDF2-202ENST00000585428 IMPDH1P20839 514 aa13□□□□□ -0.33
SDF2-202ENST00000585428 GSTM5P46439 218 aa13□□□□□ -0.33
SDF2-202ENST00000585428 KCNJ5P48544 419 aa13□□□□□ -0.33
SDF2-202ENST00000585428 PTH2RP49190 550 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms