RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	NUP107	P57740	925 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	PDCD2	Q16342	344 aa	Predicted RBP	12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	CYP27C1	Q4G0S4	372 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	TMEM211	Q6ICI0	200 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	R3HCC1L	Q7Z5L2	792 aa	Known RBP	12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	FNDC5	Q8NAU1	212 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	OR7A2P	Q8NGA2	310 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	CA5BP1	Q8WTZ4	195 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	TUBGCP3	Q96CW5	907 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	GIMAP5	Q96F15	307 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	ENKD1	Q9H0I2	346 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	KCNK9	Q9NPC2	374 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	ASIC5	Q9NY37	505 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	COQ3	Q9NZJ6	369 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	ACAD8	Q9UKU7	415 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	MAPRE3	Q9UPY8	281 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	DOCK7	Q96N67	2140 aa		12.13	□□□□□ -0.47
SREBF1-223	ENST00000584760	AKAP9	Q99996	3911 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	TMEM120B	A0PK00	339 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	GLI4	P10075	376 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	PRPS2	P11908	318 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	DDX5	P17844	614 aa	Known RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	EFNA1	P20827	205 aa	Predicted RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	EVI2B	P34910	448 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	RPL3	P39023	403 aa	Known RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	ART1	P52961	327 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	MANF	P55145	182 aa	Known RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	WDR4	P57081	412 aa	Known RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	C21orf58	P58505	322 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	MRPS22	P82650	360 aa	Known RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	BST1	Q10588	318 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	PMPCA	Q10713	525 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	GAB1	Q13480	694 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	MLC1	Q15049	377 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	EIPR1	Q53HC9	387 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	NHSL2	Q5HYW2	709 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	DCST1	Q5T197	706 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	C1orf185	Q5T7R7	199 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	IL23R	Q5VWK5	629 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	B3GNT6	Q6ZMB0	384 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	ACAD11	Q709F0	780 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	ULK2	Q8IYT8	1036 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	RND1	Q92730	232 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	TLCD1	Q96CP7	247 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	MS4A4E	Q96PG1	132 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	TTYH2	Q9BSA4	534 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	OR2B2	Q9GZK3	357 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760		Q9N2J8	555 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	EQTN	Q9NQ60	294 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	SERHL	Q9NQF3	203 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	FLRT3	Q9NZU0	649 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	CBLC	Q9ULV8	474 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	RNF6	Q9Y252	685 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	SLC6A5	Q9Y345	797 aa		12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	INTS1	Q8N201	2190 aa	Known RBP	12.12	□□□□□ -0.47
SREBF1-223	ENST00000584760	TTC36	A6NLP5	189 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	IL33	O95760	270 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	LAMP1	P11279	417 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	G6PD	P11413	515 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	GABRA1	P14867	456 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	CHRNB4	P30926	498 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	RPL14	P50914	215 aa	Known RBP	12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	SLC18A1	P54219	525 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	EMX2	Q04743	252 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	STX3	Q13277	289 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	TOMM20	Q15388	145 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	ZNHIT3	Q15649	155 aa	Predicted RBP	12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	DECR1	Q16698	335 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	SMU1	Q2TAY7	513 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	WIPI1	Q5MNZ9	446 aa	Predicted RBP	12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	EXOSC6	Q5RKV6	272 aa	Known RBP	12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	VASN	Q6EMK4	673 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	MFSD12	Q6NUT3	480 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	PLCZ1	Q86YW0	608 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	CCDC71	Q8IV32	467 aa	Predicted RBP	12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	RIMKLA	Q8IXN7	391 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	KRTCAP2	Q8N6L1	136 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	ANKRD42	Q8N9B4	389 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	ACBD4	Q8NC06	268 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	NUP43	Q8NFH3	380 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	PSMA8	Q8TAA3	256 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	NUDT8	Q8WV74	236 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	ASB5	Q8WWX0	329 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	FAM120B	Q96EK7	910 aa	Known RBP	12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	TIMP4	Q99727	224 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	PRDM14	Q9GZV8	571 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	AKTIP	Q9H8T0	292 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	TMBIM4	Q9HC24	238 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	NOP53	Q9NZM5	478 aa	Known RBP	12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	FBXL2	Q9UKC9	423 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760	ABCG2	Q9UNQ0	655 aa		12.11	□□□□□ -0.47
SREBF1-223	ENST00000584760		A0A0G2JNJ9	132 aa		12.1	□□□□□ -0.47
SREBF1-223	ENST00000584760	GXYLT2	A0PJZ3	443 aa		12.1	□□□□□ -0.47
SREBF1-223	ENST00000584760	C17orf51	A8MQB3	221 aa		12.1	□□□□□ -0.47
SREBF1-223	ENST00000584760	SCO2	O43819	266 aa		12.1	□□□□□ -0.47
SREBF1-223	ENST00000584760	FADS1	O60427	444 aa		12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms