RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 NAGLUP54802 743 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 DNAJB13P59910 316 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 C2orf80Q0P641 193 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 RCAN2Q14206 197 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 EIPR1Q53HC9 387 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 FAM219BQ5XKK7 198 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 FRMD7Q6ZUT3 714 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 LIX1LQ8IVB5 337 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 GSPT2Q8IYD1 628 aaKnown RBP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 CCDC63Q8NA47 563 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 FAM83FQ8NEG4 500 aaPredicted RBP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 CDC26Q8NHZ8 85 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 FAM76AQ8TAV0 307 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 KAT2AQ92830 837 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 ABTB1Q969K4 478 aaPredicted RBP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 TMBIM1Q969X1 311 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 SLC35A4Q96G79 324 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 METTL2AQ96IZ6 378 aaKnown RBP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 VSTM2LQ96N03 204 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 NODALQ96S42 347 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 EBPLQ9BY08 206 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 UGT2B28Q9BY64 529 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 MIEF1Q9NQG6 463 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 RRAGDQ9NQL2 400 aaPredicted RBP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 YAE1D1Q9NRH1 226 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 MID2Q9UJV3 735 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 MAPRE3Q9UPY8 281 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 EXO1Q9UQ84 846 aaKnown RBP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 WBP11Q9Y2W2 641 aaKnown RBP10.12□□□□□ -0.79
CCDC47-206ENST00000584112 SLC6A5Q9Y345 797 aa10.12□□□□□ -0.79
CCDC47-206ENST00000584112 CR1P17927 2039 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 CD8B2A6NJW9 211 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 UBFD1O14562 309 aaKnown RBP10.11□□□□□ -0.79
CCDC47-206ENST00000584112 COPEO14579 308 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 PLIN3O60664 434 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 SMPD2O60906 423 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 RSL1D1O76021 490 aaKnown RBP10.11□□□□□ -0.79
CCDC47-206ENST00000584112 CNOT4O95628 575 aaKnown RBP10.11□□□□□ -0.79
CCDC47-206ENST00000584112 SHBGP04278 402 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 CT45A8P0DMV1 189 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 CT45A9P0DMV2 189 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 UROSP10746 265 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 NTSP30990 170 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 CEACAM8P31997 349 aaPredicted RBP10.11□□□□□ -0.79
CCDC47-206ENST00000584112 SLCO1A2P46721 670 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 ASCL1P50553 236 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 PNLIPRP2P54317 469 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 FOXA1P55317 472 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 CT45A2Q5DJT8 189 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 WIPI1Q5MNZ9 446 aaPredicted RBP10.11□□□□□ -0.79
CCDC47-206ENST00000584112 LIPMQ5VYY2 423 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 NSUN5P2Q63ZY6 315 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 SCIMPQ6UWF3 145 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 ENPP6Q6UWR7 440 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 SH2D5Q6ZV89 423 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 SEM1Q6ZVN7 128 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 TRIM46Q7Z4K8 759 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 HOMEZQ8IX15 550 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 OR2B2Q9GZK3 357 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 FOLH1BQ9HBA9 442 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 GALNT9Q9HCQ5 603 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 MYNNQ9NPC7 610 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 OXSMQ9NWU1 459 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 ZNF629Q9UEG4 869 aaPredicted RBP10.11□□□□□ -0.79
CCDC47-206ENST00000584112 FOXD3Q9UJU5 478 aaPredicted RBP10.11□□□□□ -0.79
CCDC47-206ENST00000584112 OR10H1Q9Y4A9 318 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 WIF1Q9Y5W5 379 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 VWFP04275 2813 aa10.11□□□□□ -0.79
CCDC47-206ENST00000584112 A0A087WV62 115 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 SMIM23A6NLE4 172 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 MYO1GB0I1T2 1018 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 TSPAN2O60636 221 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 FAM157CP0CG43 387 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 CYP4B1P13584 511 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 CPA3P15088 417 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 BMP5P22003 454 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 PTGDSP41222 190 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 NCBP2P52298 156 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 CORO7P57737 925 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 ZNF155Q12901 538 aaPredicted RBP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 FAM71E1Q6IPT2 247 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 IKBIPQ70UQ0 350 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 LARP4Q71RC2 724 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 YRDCQ86U90 279 aaKnown RBP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 IFNEQ86WN2 208 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 PLCZ1Q86YW0 608 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 SLC44A2Q8IWA5 706 aaPredicted RBP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 RELL2Q8NC24 303 aaPredicted RBP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 TNIP2Q8NFZ5 429 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 OR7G2Q8NG99 324 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 OR14L1PQ8NHC6 308 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 ZPLD1Q8TCW7 415 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 PERPQ96FX8 193 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 WDYHV1Q96HA8 205 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 TRIB1Q96RU8 372 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 ADOQ96SZ5 270 aa10.1□□□□□ -0.79
CCDC47-206ENST00000584112 IQCGQ9H095 443 aaKnown RBP10.1□□□□□ -0.79
CCDC47-206ENST00000584112 ANKRA2Q9H9E1 313 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms