RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PTGR1Q14914 329 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 HHATQ5VTY9 493 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 OR5M10Q6IEU7 315 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 MCEMP1Q8IX19 187 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 PM20D2Q8IYS1 436 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 NUP43Q8NFH3 380 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 OR14L1PQ8NHC6 308 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 GPR151Q8TDV0 419 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 ABTB1Q969K4 478 aaPredicted RBP18.61■□□□□ 0.57
SS18-224ENST00000584083 DTNBP1Q96EV8 351 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 UCK2Q9BZX2 261 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 KCNJ16Q9NPI9 418 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.61■□□□□ 0.57
SS18-224ENST00000584083 RAP2CQ9Y3L5 183 aa18.61■□□□□ 0.57
SS18-224ENST00000584083 INTS1Q8N201 2190 aaKnown RBP18.6■□□□□ 0.57
SS18-224ENST00000584083 AHRRA9YTQ3 701 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 FAM47E-STBD1D6RA91 191 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 SNUPNO95149 360 aaKnown RBP18.6■□□□□ 0.57
SS18-224ENST00000584083 IL33O95760 270 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 LAMP1P11279 417 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 BMP7P18075 431 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 EVI2BP34910 448 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 KIR3DL1P43629 444 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 PSMD4P55036 377 aaKnown RBP18.6■□□□□ 0.57
SS18-224ENST00000584083 VPS26BQ4G0F5 336 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 CPTPQ5TA50 214 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 VASNQ6EMK4 673 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 SLC9A6Q92581 669 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 PRPF18Q99633 342 aaKnown RBP18.6■□□□□ 0.57
SS18-224ENST00000584083 UGT2B28Q9BY64 529 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 C20orf27Q9GZN8 174 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 ATAD3AQ9NVI7 634 aa18.6■□□□□ 0.57
SS18-224ENST00000584083 A0A0G2JNJ9 132 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 A0A1W2PRB8 838 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 GXYLT2A0PJZ3 443 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 NKX2-6A6NCS4 301 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 EMC8O43402 210 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 KCNH1O95259 989 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 ACTL6AO96019 429 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 PRF1P14222 555 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 PRPS1L1P21108 318 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 ADH7P40394 386 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 ZFP36L2P47974 494 aaKnown RBP18.59■□□□□ 0.57
SS18-224ENST00000584083 CLK3P49761 638 aaKnown RBP18.59■□□□□ 0.57
SS18-224ENST00000584083 RPL14P50914 215 aaKnown RBP18.59■□□□□ 0.57
SS18-224ENST00000584083 MAD2L1Q13257 205 aaPredicted RBP18.59■□□□□ 0.57
SS18-224ENST00000584083 SF3B4Q15427 424 aaKnown RBP eCLIP18.59■□□□□ 0.574e-8■■■□□ 18.5
SS18-224ENST00000584083 NHSL2Q5HYW2 709 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 CDRT4Q8N9R6 151 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 OR4K17Q8NGC6 315 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 RNF138Q8WVD3 245 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 PIK3R3Q92569 461 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 RMND5BQ96G75 393 aaPredicted RBP18.59■□□□□ 0.57
SS18-224ENST00000584083 MS4A4EQ96PG1 132 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 OR2B2Q9GZK3 357 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 SDHAF3Q9NRP4 125 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 TAS2R10Q9NYW0 307 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 FLRT3Q9NZU0 649 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 NTMQ9P121 344 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 PPP4R1LQ9P1A2 415 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 Q9UFV3 132 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 DKKL1Q9UK85 242 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 FBXL2Q9UKC9 423 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 SNX8Q9Y5X2 465 aa18.59■□□□□ 0.57
SS18-224ENST00000584083 TEX15Q9BXT5 2789 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 PCNX3Q9H6A9 2034 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 FADS1O60427 444 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 G6PDP11413 515 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 GAS1P54826 345 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 PRR5P85299 388 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 EMX2Q04743 252 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 STX5Q13190 355 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 MLC1Q15049 377 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 ACSF3Q4G176 576 aaPredicted RBP18.58■□□□□ 0.56
SS18-224ENST00000584083 DCST1Q5T197 706 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 RIPPLY2Q5TAB7 128 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 IFNEQ86WN2 208 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 KIRREL3Q8IZU9 778 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 KRTCAP2Q8N6L1 136 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 FBXO30Q8TB52 745 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 SORT1Q99523 831 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 PRDM14Q9GZV8 571 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 ZCCHC3Q9NUD5 404 aaKnown RBP18.58■□□□□ 0.56
SS18-224ENST00000584083 NOP53Q9NZM5 478 aaKnown RBP18.58■□□□□ 0.56
SS18-224ENST00000584083 ABCG2Q9UNQ0 655 aa18.58■□□□□ 0.56
SS18-224ENST00000584083 TMEM120BA0PK00 339 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 TOXO94900 526 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 NKX2-2O95096 273 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 TCEA1P23193 301 aaKnown RBP18.57■□□□□ 0.56
SS18-224ENST00000584083 SRD5A2P31213 254 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 LSM12Q3MHD2 195 aaKnown RBP18.57■□□□□ 0.56
SS18-224ENST00000584083 BEND6Q5SZJ8 279 aaPredicted RBP18.57■□□□□ 0.56
SS18-224ENST00000584083 MFSD12Q6NUT3 480 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 ENPP6Q6UWR7 440 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 MEX3BQ6ZN04 569 aaKnown RBP18.57■□□□□ 0.56
SS18-224ENST00000584083 TRIM42Q8IWZ5 723 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 NATD1Q8N6N6 113 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 MGARPQ8TDB4 240 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 NUDT8Q8WV74 236 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 OR5P2Q8WZ92 322 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms