RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 RHPN2P1A8MT19 583 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LOC110117498-PIK3R3F6TDL0 507 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 STATHP02808 62 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CSF2P04141 144 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CISD3P0C7P0 127 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IMPA1P29218 277 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MAT2AP31153 395 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CASP3P42574 277 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RGS6P49758 472 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.663e-9■■□□□ 12.5
CDK5RAP3-231ENST00000584063 SLC3A1Q07837 685 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 HYAL1Q12794 435 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MAP4K2Q12851 820 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RAET1GQ6H3X3 334 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FAHD1Q6P587 224 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SYCE2Q6PIF2 218 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 VITQ6UXI7 678 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC46A3Q7Z3Q1 461 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NRARPQ7Z6K4 114 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 WDR48Q8TAF3 677 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NANPQ8TBE9 248 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FAM174AQ8TBP5 190 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 WDR20Q8TBZ3 569 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NEIL2Q969S2 332 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LMF1Q96S06 567 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TTYH2Q9BSA4 534 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MMP28Q9H239 520 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SAV1Q9H4B6 383 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CHMP1AQ9HD42 196 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MUTYHQ9UIF7 546 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 UGT2A1Q9Y4X1 527 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CFAP20Q9Y6A4 193 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TMEM210A6NLX4 147 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CDK1P06493 297 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GGT2P36268 569 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PTGES3Q15185 160 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SYTL3Q4VX76 610 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FAM69AQ5T7M9 428 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ETFRF1Q6IPR1 90 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TNFAIP8L2Q6P589 184 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C5orf46Q6UWT4 87 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SYNPOQ8N3V7 929 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 AMER2Q8N7J2 671 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 AQP11Q8NBQ7 271 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC37A3Q8NCC5 494 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MYADMQ96S97 322 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FAM129BQ96TA1 746 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC35A5Q9BS91 424 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DOHHQ9BU89 302 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CPEB1Q9BZB8 566 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PRDM9Q9NQV7 894 aa10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-231ENST00000584063 UBE2CO00762 179 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GNB5O14775 395 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RGS13O14921 159 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GASTP01350 101 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FABP1P07148 127 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C8GP07360 202 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF888P0CJ79 500 aaPredicted RBP10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CBSLP0DN79 551 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CNR2P34972 360 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CBSP35520 551 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF234Q14588 700 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DUSP7Q16829 419 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SPANXN2Q5MJ10 180 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF385CQ66K41 422 aaPredicted RBP10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TRAT1Q6PIZ9 186 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 BRAT1Q6PJG6 821 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TMEM220Q6QAJ8 160 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PARS2Q7L3T8 475 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CAMKMTQ7Z624 323 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ABI3BPQ7Z7G0 1075 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DPPA2Q7Z7J5 298 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RBM45Q8IUH3 476 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IQCF1Q8N6M8 205 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SUSD6Q92537 303 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RAB8BQ92930 207 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TRMT61AQ96FX7 289 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MGLLQ99685 303 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 WFDC6Q9BQY6 131 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MMP27Q9H306 513 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CCNB1IP1Q9NPC3 277 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TMEM45AQ9NWC5 275 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 VPS13AQ96RL7 3174 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CLDN24A6NM45 220 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GTPBP1O00178 669 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CLDN4O14493 209 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 AKR7A2O43488 359 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CYTIPO60759 359 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MMP20O60882 483 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SEMG1P04279 462 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LCN1P31025 176 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GJA4P35212 333 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NUDT1P36639 197 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CAV3P56539 151 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RUNX3Q13761 415 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C3orf33Q6P1S2 294 aa10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TRMT11Q7Z4G4 463 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC34A3Q8N130 599 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms