RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PRIM2P49643 509 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 UFM1P61960 85 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 IRX1P78414 480 aaPredicted RBP11.53□□□□□ -0.56
SNORD55-201ENST00000581525 LRRC74AQ0VAA2 488 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 ZNF155Q12901 538 aaPredicted RBP11.53□□□□□ -0.56
SNORD55-201ENST00000581525 DUSP5Q16690 384 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 PDCD4Q53EL6 469 aaKnown RBP11.53□□□□□ -0.56
SNORD55-201ENST00000581525 C1QL3Q5VWW1 255 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 CDC73Q6P1J9 531 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 MTFR2Q6P444 385 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 NEIL3Q8TAT5 605 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 C16orf58Q96GQ5 468 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 CCDC115Q96NT0 180 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 OR52B2Q96RD2 323 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 VKORC1Q9BQB6 163 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 CCDC28BQ9BUN5 200 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 ACTRT3Q9BYD9 372 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 ACBD3Q9H3P7 528 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 METTL7AQ9H8H3 244 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 TMEM45AQ9NWC5 275 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 FAM120CQ9NX05 1096 aaKnown RBP11.53□□□□□ -0.56
SNORD55-201ENST00000581525 ZIM2Q9NZV7 527 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 MARCOQ9UEW3 520 aaPredicted RBP11.53□□□□□ -0.56
SNORD55-201ENST00000581525 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 OR10H1Q9Y4A9 318 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 LIPGQ9Y5X9 500 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 PTPN13Q12923 2485 aa11.53□□□□□ -0.56
SNORD55-201ENST00000581525 NINQ8N4C6 2090 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 TRGV5A0A0B4J1U4 118 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 B4DXG7 233 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 E9PBE3 544 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 PRRG2O14669 202 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 BCKDKO14874 412 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 KCNK2O95069 426 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 KCNH1O95259 989 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 KRT16P08779 473 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 HOXD4P09016 255 aaPredicted RBP11.52□□□□□ -0.57
SNORD55-201ENST00000581525 EFNA1P20827 205 aaPredicted RBP11.52□□□□□ -0.57
SNORD55-201ENST00000581525 ENDOUP21128 410 aaKnown RBP11.52□□□□□ -0.57
SNORD55-201ENST00000581525 TBXA2RP21731 343 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 IL12BP29460 328 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 KRT20P35900 424 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 IDH3AP50213 366 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 PRKAG1P54619 331 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 PER3P56645 1201 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 PGS1Q32NB8 556 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 GXYLT1Q4G148 440 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 SPANXN4Q5MJ08 99 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 BHLHB9Q6PI77 547 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 WDR53Q7Z5U6 358 aaPredicted RBP11.52□□□□□ -0.57
SNORD55-201ENST00000581525 FJX1Q86VR8 437 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 PLCZ1Q86YW0 608 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 FADS6Q8N9I5 356 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 VPS37AQ8NEZ2 397 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 OR1J4Q8NGS1 313 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 PIK3R3Q92569 461 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 EFHD2Q96C19 240 aaPredicted RBP11.52□□□□□ -0.57
SNORD55-201ENST00000581525 BTBD2Q9BX70 525 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 OR2B2Q9GZK3 357 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 GALNT9Q9HCQ5 603 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 ZCCHC3Q9NUD5 404 aaKnown RBP11.52□□□□□ -0.57
SNORD55-201ENST00000581525 B4GALT7Q9UBV7 327 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 WIF1Q9Y5W5 379 aa11.52□□□□□ -0.57
SNORD55-201ENST00000581525 TRGV8A0A0C4DH27 118 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 GOLGA8QA0A0J9YX86 632 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 A0A1W2PQD3 144 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 GOLGA8OA6NCC3 632 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 ALG1L2C9J202 215 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 GOLGA8NF8WBI6 632 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 CCL21O00585 134 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 UBDO15205 165 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 PDE9AO76083 593 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 PGRP06401 933 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 ALOX5P09917 674 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 ABOP16442 354 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 UQCRC2P22695 453 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 S100A3P33764 101 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 EVI2BP34910 448 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 CASP6P55212 293 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 ADORA2A-AS1P86434 159 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 VASNQ6EMK4 673 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 APOOLQ6UXV4 268 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 RPTNQ6XPR3 784 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 MSANTD1Q6ZTZ1 278 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 C6orf120Q7Z4R8 191 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 CLECL1Q8IZS7 167 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 EID3Q8N140 333 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 CHDHQ8NE62 594 aaPredicted RBP11.51□□□□□ -0.57
SNORD55-201ENST00000581525 GPR151Q8TDV0 419 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 SLC9A6Q92581 669 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 SARAFQ96BY9 339 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 CCDC120Q96HB5 630 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 RTN4RQ9BZR6 473 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 TP63Q9H3D4 680 aaPredicted RBP11.51□□□□□ -0.57
SNORD55-201ENST00000581525 HHATLQ9HCP6 504 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 SERHLQ9NQF3 203 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 KLRF1Q9NZS2 232 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 SPRR3Q9UBC9 169 aa11.51□□□□□ -0.57
SNORD55-201ENST00000581525 TINAGQ9UJW2 476 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms