RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SIX4Q9UIU6 781 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 SLC22A13Q9Y226 551 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 WIF1Q9Y5W5 379 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 URGCP-MRPS24S4R325 110 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 PCDH11XQ9BZA7 1347 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PCDH11YQ9BZA8 1340 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TMEM272A0A1B0GTI8 110 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 A0A1W2PPC1 479 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 A0A1W2PPQ1 181 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TMEM213A2RRL7 107 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZNF233A6NK53 670 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 A8MX80 341 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZNF814B7Z6K7 855 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TMEM238C9JI98 176 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PPIAL4DF5H284 164 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 KLRC4-KLRK1H3BQV0 150 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 M0QZK8 103 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 M0R036 132 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 GOSR2O14653 212 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 OGG1O15527 345 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZSCAN12O43309 604 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TSPAN2O60636 221 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 MAGEC1O60732 1142 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 UPK3AO75631 287 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 NKX2-2O95096 273 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 NDUFB8O95169 186 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZWINTO95229 277 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PROS1P07225 676 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 NGFRP08138 427 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PSKH1P11801 424 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 CEACAM1P13688 526 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZNF26P17031 533 aaPredicted RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 F8A1P23610 371 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ELAVL4P26378 380 aaKnown RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 PPP2R1BP30154 601 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TGFBR2P37173 567 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TMPOP42166 694 aaKnown RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 MMP15P51511 669 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 DNA2P51530 1060 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TPMTP51580 245 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 P2RY4P51582 365 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 SUOXP51687 545 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PKNOX1P55347 436 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 DCDC1P59894 354 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PSME3P61289 254 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 CDK16Q00536 496 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 MYBPC1Q00872 1141 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PAX5Q02548 391 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 RIPPLY1Q0D2K3 151 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PDIA2Q13087 525 aaKnown RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 TNK1Q13470 666 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PEX6Q13608 980 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 DNASE1L3Q13609 305 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ACOX1Q15067 660 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 SPA17Q15506 151 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 EXT1Q16394 746 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ACKR1Q16570 336 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 C5orf64Q2M2E5 130 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZNF699Q32M78 642 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TMEM35AQ53FP2 167 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ACTBL2Q562R1 376 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 H3F3CQ6NXT2 135 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 FBXL22Q6P050 247 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PRSS55Q6UWB4 352 aaPredicted RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 LRRN1Q6UXK5 716 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZNF562Q6V9R5 426 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 CERS6Q6ZMG9 384 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 SLC39A5Q6ZMH5 540 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 RBM44Q6ZP01 1051 aaKnown RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 STOX1Q6ZVD7 989 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZNF546Q86UE3 836 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 CATSPERDQ86XM0 798 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TMC8Q8IU68 726 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 CCDC71Q8IV32 467 aaPredicted RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMG8-205ENST00000580798 ZBED8Q8IZ13 594 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 CYP4Z2PQ8N1L4 340 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 STK40Q8N2I9 435 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 MTURNQ8N3F0 131 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 METTL4Q8N3J2 472 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 GTPBP8Q8N3Z3 284 aaPredicted RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 KIF2BQ8N4N8 673 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 OR2L5Q8NG80 312 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 TMEM255BQ8WV15 326 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 ACOT11Q8WXI4 607 aaPredicted RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 SORCS1Q8WY21 1168 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 FAR2Q96K12 515 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 LRR1Q96L50 414 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 MTERF1Q99551 399 aaKnown RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 SEPHS2Q99611 448 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 SEPT5Q99719 369 aaPredicted RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 PRRT1Q99946 306 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 MAPKAP1Q9BPZ7 522 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 UTP23Q9BRU9 249 aaKnown RBP3.7□□□□□ -1.82
SMG8-205ENST00000580798 ST6GALNAC5Q9BVH7 336 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 GSDMCQ9BYG8 508 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 CCDC90BQ9GZT6 254 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 DPEP3Q9H4B8 488 aa3.7□□□□□ -1.82
SMG8-205ENST00000580798 PDZD7Q9H5P4 517 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms