RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 JADE3Q92613 823 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 SNRNP40Q96DI7 357 aaKnown RBP11.19□□□□□ -0.62
CCDC84-209ENST00000580556 AURKBQ96GD4 344 aaPredicted RBP11.19□□□□□ -0.62
CCDC84-209ENST00000580556 C16orf58Q96GQ5 468 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 LMF1Q96S06 567 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 SMAD5Q99717 465 aaKnown RBP11.19□□□□□ -0.62
CCDC84-209ENST00000580556 SERHL2Q9H4I8 314 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ASF1BQ9NVP2 202 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ABI3Q9P2A4 366 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 PCDHGB7Q9Y5F8 929 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 APCP25054 2843 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 A8MUI8 341 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 HNRNPCL1O60812 293 aaKnown RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 ITGA10O75578 1167 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 OR2J2O76002 312 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 UBOX5O94941 541 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 NADKO95544 446 aaPredicted RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 T-ENOLP0DO92 83 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 SLC6A2P23975 617 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 LCN1P31025 176 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 PIGAP37287 484 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 TMED10P49755 219 aaKnown RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 RPS26P62854 115 aaKnown RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 MFAP5Q13361 173 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 RGNQ15493 299 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 DUSP5Q16690 384 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 AP1ARQ63HQ0 302 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 HEPHL1Q6MZM0 1159 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 OPN5Q6U736 354 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 ANGPTL8Q6UXH0 198 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 ISLR2Q6UXK2 745 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 HPS6Q86YV9 775 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 SLC34A3Q8N130 599 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 SIRT6Q8N6T7 355 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 COX18Q8N8Q8 333 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 FDCSPQ8NFU4 85 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 SLC9A6Q92581 669 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 OR7D2Q96RA2 312 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 RASL10BQ96S79 203 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 SLC39A3Q9BRY0 314 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 SPATA9Q9BWV2 254 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 BTBD2Q9BX70 525 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 C1orf21Q9H246 121 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 OR51I1Q9H343 314 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 IKZF5Q9H5V7 419 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 CDCP1Q9H5V8 836 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 ZNF552Q9H707 407 aaPredicted RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 KAT8Q9H7Z6 458 aaKnown RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 TRIM45Q9H8W5 580 aaPredicted RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 NANOGQ9H9S0 305 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 IL1RL2Q9HB29 575 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 EXD2Q9NVH0 621 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 MRTO4Q9UKD2 239 aaKnown RBP11.18□□□□□ -0.62
CCDC84-209ENST00000580556 CBLCQ9ULV8 474 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 PDZD2O15018 2839 aa11.18□□□□□ -0.62
CCDC84-209ENST00000580556 CELSR1Q9NYQ6 3014 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 ITPR3Q14573 2671 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 OR6C70A6NIJ9 312 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 A6NL46 340 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 WWP2O00308 870 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 HMGN4O00479 90 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 ABCB7O75027 752 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 NME6O75414 186 aaPredicted RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 TNFRSF21O75509 655 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 ATP5HO75947 161 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 C1QCP02747 245 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 FBXO45P0C2W1 286 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 ABCD3P28288 659 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 GABRA3P34903 492 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 CPA2P48052 419 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 SSR4P51571 173 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 NR0B1P51843 470 aaKnown RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 PSMD4P55036 377 aaKnown RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 MTPNP58546 118 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 MRPS22P82650 360 aaKnown RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 BNIP1Q12981 228 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 CAPRIN1Q14444 709 aaKnown RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 DECR1Q16698 335 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 SPATS1Q496A3 300 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 COX20Q5RI15 118 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 ATAD3BQ5T9A4 648 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 TNFAIP8L2Q6P589 184 aaPredicted RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 C16orf89Q6UX73 402 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 IGFL3Q6UXB1 125 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 NET1Q7Z628 596 aaPredicted RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 SERPINA11Q86U17 422 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 SLC44A2Q8IWA5 706 aaPredicted RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 PGAM4Q8N0Y7 254 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 CISD2Q8N5K1 135 aaKnown RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 METTL25Q8N6Q8 603 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 HORMAD2Q8N7B1 307 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 CHDHQ8NE62 594 aaPredicted RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 FAM110BQ8TC76 370 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 PNPT1Q8TCS8 783 aaKnown RBP11.17□□□□□ -0.62
CCDC84-209ENST00000580556 GPR151Q8TDV0 419 aa11.17□□□□□ -0.62
CCDC84-209ENST00000580556 THAP3Q8WTV1 239 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms